RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 ERMP1Q7Z2K6 904 aa15.56■□□□□ 0.08
UBAP1-201ENST00000297661 LINC00523Q86TU6 105 aa15.56■□□□□ 0.08
UBAP1-201ENST00000297661 TMCO5AQ8N6Q1 288 aa15.56■□□□□ 0.08
UBAP1-201ENST00000297661 KLHL5Q96PQ7 755 aa15.56■□□□□ 0.08
UBAP1-201ENST00000297661 NANOGQ9H9S0 305 aa15.56■□□□□ 0.08
UBAP1-201ENST00000297661 SEPT3Q9UH03 358 aa15.56■□□□□ 0.08
UBAP1-201ENST00000297661 ANKRD6Q9Y2G4 727 aa15.56■□□□□ 0.08
UBAP1-201ENST00000297661 KCNH1O95259 989 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 APOA4P06727 396 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 PCYT1AP49585 367 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 GRSF1Q12849 480 aaKnown RBP eCLIP15.55■□□□□ 0.08
UBAP1-201ENST00000297661 FRG1Q14331 258 aaKnown RBP15.55■□□□□ 0.08
UBAP1-201ENST00000297661 SLC36A3Q495N2 470 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 INTS6LQ5JSJ4 861 aaKnown RBP15.55■□□□□ 0.08
UBAP1-201ENST00000297661 C6orf10Q5SRN2 563 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 LDLRAP1Q5SW96 308 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 BTLAQ7Z6A9 289 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 EPHX4Q8IUS5 362 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 DHRS1Q96LJ7 313 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 ALPK1Q96QP1 1244 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 MROQ9BYG7 248 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 AP5M1Q9H0R1 490 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 AGO3Q9H9G7 860 aaKnown RBP15.55■□□□□ 0.08
UBAP1-201ENST00000297661 TRPV5Q9NQA5 729 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 AAR2Q9Y312 384 aaKnown RBP15.55■□□□□ 0.08
UBAP1-201ENST00000297661 TCAF1Q9Y4C2 921 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 ATP6AP2A0A1C7CYW4 349 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 FAM149AA5PLN7 773 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 ATP6AP2O75787 350 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 YAP1P46937 504 aaKnown RBP15.55■□□□□ 0.08
UBAP1-201ENST00000297661 SLC12A2P55011 1212 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 INAQ16352 499 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 PERM1Q5SV97 790 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 CXCL17Q6UXB2 119 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 HOMEZQ8IX15 550 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 PACRGLQ8N7B6 248 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 KLHL25Q9H0H3 589 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 VTI1BQ9UEU0 232 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 MID2Q9UJV3 735 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 FBXO5Q9UKT4 447 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 NOX1Q9Y5S8 564 aa15.55■□□□□ 0.08
UBAP1-201ENST00000297661 OR51F1A6NGY5 319 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 SDHDO14521 159 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 CLOCKO15516 846 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 GJB3O75712 270 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 IDUAP35475 653 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 FSCN1Q16658 493 aaKnown RBP15.54■□□□□ 0.08
UBAP1-201ENST00000297661 UPP1Q16831 310 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 ABRAXAS1Q6UWZ7 409 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 TMEM86AQ8N2M4 240 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 RDH11Q8TC12 318 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 EXT2Q93063 718 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 EFHD2Q96C19 240 aaPredicted RBP15.54■□□□□ 0.08
UBAP1-201ENST00000297661 MRGPRX2Q96LB1 330 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 MRPL46Q9H2W6 279 aaKnown RBP15.54■□□□□ 0.08
UBAP1-201ENST00000297661 SPAG4Q9NPE6 437 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 CACNA2D2Q9NY47 1150 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 GMPR2Q9P2T1 348 aaKnown RBP15.54■□□□□ 0.08
UBAP1-201ENST00000297661 ST14Q9Y5Y6 855 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 RNF103-CHMP3A0A140T963 221 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 CCDC85CA6NKD9 419 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 EN2P19622 333 aaPredicted RBP15.54■□□□□ 0.08
UBAP1-201ENST00000297661 CPT1AP50416 773 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 HK2P52789 917 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 LRP8Q14114 963 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 INTS11Q5TA45 600 aaKnown RBP15.54■□□□□ 0.08
UBAP1-201ENST00000297661 FRA10AC1Q70Z53 315 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 DHFR2Q86XF0 187 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 FCRL5Q96RD9 977 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 HERC2P3Q9BVR0 1158 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 NDEL1Q9GZM8 345 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 UPF3AQ9H1J1 476 aaKnown RBP15.54■□□□□ 0.08
UBAP1-201ENST00000297661 CCDC167Q9P0B6 97 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 CEP290O15078 2479 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 TANC1Q9C0D5 1861 aa15.54■□□□□ 0.08
UBAP1-201ENST00000297661 FAM47E-STBD1D6RA91 191 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 CPB1P15086 417 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 CCNCP24863 283 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 PCSK1P29120 753 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 TMBIM6P55061 237 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 MRPS6P82932 125 aaKnown RBP15.53■□□□□ 0.08
UBAP1-201ENST00000297661 BTBD8Q5XKL5 378 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 CLEC6AQ6EIG7 209 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 OR9I1Q8NGQ6 314 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 OR13F1Q8NGS4 319 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 ANKRD49Q8WVL7 239 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 NACA2Q9H009 215 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 EHD1Q9H4M9 534 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 SIAEQ9HAT2 523 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 NMUR1Q9HB89 426 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 CD300AQ9UGN4 299 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 AURKCQ9UQB9 309 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 SLCO1B7G3V0H7 640 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 IRAK2O43187 625 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 ANXA9O76027 345 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 CHRNA1P02708 482 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 OPRL1P41146 370 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 WNT3AP56704 352 aa15.53■□□□□ 0.08
UBAP1-201ENST00000297661 PURAQ00577 322 aaKnown RBP15.53■□□□□ 0.08
UBAP1-201ENST00000297661 STX5Q13190 355 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms