RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 KELP23276 732 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 TRIM23P36406 574 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 CCT5P48643 541 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 MNAT1P51948 309 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 STC1P52823 247 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 GEMP55040 296 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 C1orf61Q13536 156 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 GLE1Q53GS7 698 aaKnown RBP12.05□□□□□ -0.48
HMGB2-201ENST00000296503 KDELC1Q6UW63 502 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 KANSL1Q7Z3B3 1105 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 PHACTR4Q8IZ21 702 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 NRSN1Q8IZ57 195 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 PELI3Q8N2H9 469 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 FAM71DQ8N9W8 422 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 BCAS4Q8TDM0 211 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 SCAMP4Q969E2 229 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 OXNAD1Q96HP4 312 aaPredicted RBP12.05□□□□□ -0.48
HMGB2-201ENST00000296503 CNDP2Q96KP4 475 aaKnown RBP12.05□□□□□ -0.48
HMGB2-201ENST00000296503 GBA3Q9H227 469 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 CARD9Q9H257 536 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 TCEAL2Q9H3H9 227 aaPredicted RBP12.05□□□□□ -0.48
HMGB2-201ENST00000296503 MAGEE1Q9HCI5 957 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 PHPT1Q9NRX4 125 aaPredicted RBP12.05□□□□□ -0.48
HMGB2-201ENST00000296503 PKD2L2Q9NZM6 624 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 SPASTQ9UBP0 616 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 KLQ9UEF7 1012 aa12.05□□□□□ -0.48
HMGB2-201ENST00000296503 APOBEC3BQ9UH17 382 aaKnown RBP12.05□□□□□ -0.48
HMGB2-201ENST00000296503 APOBEC2Q9Y235 224 aaKnown RBP12.05□□□□□ -0.48
HMGB2-201ENST00000296503 LOC285095A0A1B0GVY8 99 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 AQP9O43315 295 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 TNFSF14O43557 240 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 TNFP01375 233 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 EPOP01588 193 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 SLC4A1P02730 911 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 HOXC4P09017 264 aaPredicted RBP12.04□□□□□ -0.48
HMGB2-201ENST00000296503 ALPPL2P10696 532 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 SRP54P61011 504 aaKnown RBP12.04□□□□□ -0.48
HMGB2-201ENST00000296503 DPTQ07507 201 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 FOXC1Q12948 553 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 PRRT3Q5FWE3 981 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 ARHGEF18Q6ZSZ5 1173 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 LYSMD3Q7Z3D4 306 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 RBFAQ8N0V3 343 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 PNPLA1Q8N8W4 532 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 BAHD1Q8TBE0 780 aaPredicted RBP12.04□□□□□ -0.48
HMGB2-201ENST00000296503 C1orf54Q8WWF1 131 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 MRGPRX2Q96LB1 330 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 SPATA13Q96N96 652 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 SRPK1Q96SB4 655 aaKnown RBP12.04□□□□□ -0.48
HMGB2-201ENST00000296503 TMEM121Q9BTD3 319 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 RIOK2Q9BVS4 552 aaKnown RBP12.04□□□□□ -0.48
HMGB2-201ENST00000296503 LGR4Q9BXB1 951 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 FSD1LQ9BXM9 530 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 TLR10Q9BXR5 811 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 AAR2Q9Y312 384 aaKnown RBP12.04□□□□□ -0.48
HMGB2-201ENST00000296503 C5orf60A6NFR6 353 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 TMEM202A6NGA9 273 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 ENC1O14682 589 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 SCAMP1O15126 338 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 SIGLEC6O43699 453 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 CEP104O60308 925 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 RASGRP1O95267 797 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 AGTP01019 485 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 ATXN1LP0C7T5 689 aaKnown RBP12.04□□□□□ -0.48
HMGB2-201ENST00000296503 FTH1P19P0C7X4 201 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 PSMB4P28070 264 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 CXCR5P32302 372 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 SPINT3P49223 89 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 HK3P52790 923 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 KIAA1024LP59773 190 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 CDKN3Q16667 212 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 ALG11Q2TAA5 492 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 SIRPB2Q5JXA9 342 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 GLRX5Q86SX6 157 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 SLCO6A1Q86UG4 719 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 NLRP8Q86W28 1048 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 HEATR4Q86WZ0 1026 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 ZNF548Q8NEK5 533 aaPredicted RBP12.04□□□□□ -0.48
HMGB2-201ENST00000296503 OR56A4Q8NGH8 313 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 SLC35B2Q8TB61 432 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 ATG4AQ8WYN0 398 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.04□□□□□ -0.489e-8■■□□□ 14.5
HMGB2-201ENST00000296503 FAM83DQ9H4H8 585 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 PNMA8BQ9ULN7 279 aaPredicted RBP12.04□□□□□ -0.48
HMGB2-201ENST00000296503 DOLKQ9UPQ8 538 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 ZNF148Q9UQR1 794 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 ZNF711Q9Y462 761 aa12.04□□□□□ -0.48
HMGB2-201ENST00000296503 TRIM38O00635 465 aa12.03□□□□□ -0.48
HMGB2-201ENST00000296503 PYGLP06737 847 aa12.03□□□□□ -0.48
HMGB2-201ENST00000296503 MYCLP1P12525 358 aaPredicted RBP12.03□□□□□ -0.48
HMGB2-201ENST00000296503 STIP1P31948 543 aaKnown RBP12.03□□□□□ -0.48
HMGB2-201ENST00000296503 CHRNA4P43681 627 aa12.03□□□□□ -0.48
HMGB2-201ENST00000296503 SNX1Q13596 522 aa12.03□□□□□ -0.48
HMGB2-201ENST00000296503 TCEA2Q15560 299 aa12.03□□□□□ -0.48
HMGB2-201ENST00000296503 SLC1A5Q15758 541 aa12.03□□□□□ -0.48
HMGB2-201ENST00000296503 WLSQ5T9L3 541 aa12.03□□□□□ -0.48
HMGB2-201ENST00000296503 ZNF765Q7L2R6 523 aa12.03□□□□□ -0.48
HMGB2-201ENST00000296503 TMC3Q7Z5M5 1100 aa12.03□□□□□ -0.48
HMGB2-201ENST00000296503 RAVER1Q8IY67 606 aaKnown RBP12.03□□□□□ -0.48
HMGB2-201ENST00000296503 EIF1ADQ8N9N8 165 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms