RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 SNHG28P0DPA3 235 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 TUFMP49411 452 aaKnown RBP11□□□□□ -0.65
PBRM1-201ENST00000296302 COPZ1P61923 177 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 MERTKQ12866 999 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 LCP2Q13094 533 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 SEMA5AQ13591 1074 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 LCN1P1Q5VSP4 162 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 FAM117BQ6P1L5 589 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 C12orf29Q8N999 325 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 AGAP2Q99490 1192 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 GBA3Q9H227 469 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 EIF2B3Q9NR50 452 aaKnown RBP11□□□□□ -0.65
PBRM1-201ENST00000296302 UXTQ9UBK9 157 aaPredicted RBP11□□□□□ -0.65
PBRM1-201ENST00000296302 ST3GAL5Q9UNP4 418 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 TDRKHQ9Y2W6 561 aaKnown RBP11□□□□□ -0.65
PBRM1-201ENST00000296302 IRAK3Q9Y616 596 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 TLL2Q9Y6L7 1015 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 BCL9O00512 1426 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 ARHGEF33A8MVX0 844 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 ZNF99A8MXY4 864 aaPredicted RBP11□□□□□ -0.65
PBRM1-201ENST00000296302 KHDRBS3O75525 346 aaKnown RBP11□□□□□ -0.65
PBRM1-201ENST00000296302 GTF2E2P29084 291 aaKnown RBP11□□□□□ -0.65
PBRM1-201ENST00000296302 UGCGQ16739 394 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 FRMD7Q6ZUT3 714 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 AHSA2Q719I0 299 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 PGBD3Q8N328 593 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 ENDOVQ8N8Q3 282 aaKnown RBP11□□□□□ -0.65
PBRM1-201ENST00000296302 PDCD10Q9BUL8 212 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 RACGAP1Q9H0H5 632 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 CHRAC1Q9NRG0 131 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 DMAC2Q9NW81 257 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 FAM198AQ9UFP1 575 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 ZNHIT2Q9UHR6 403 aa11□□□□□ -0.65
PBRM1-201ENST00000296302 A0A088AWK7 358 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 SLC22A1O15245 554 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 MFSD11O43934 449 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 CILPO75339 1184 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 ZNF10P21506 573 aaPredicted RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 ATP5C1P36542 298 aaKnown RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 MFSD10Q14728 455 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 XKR6Q5GH73 641 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 TMPRSS11AQ6ZMR5 421 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 RBFAQ8N0V3 343 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 WDR48Q8TAF3 677 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 SUCOQ9UBS9 1254 aaKnown RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 DERAQ9Y315 318 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 SPATA31C2B4DYI2 1134 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 GRM5P41594 1212 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 KIR3DL1P43629 444 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 IL31RAQ8NI17 732 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 ITFG2Q969R8 447 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 ASB9Q96DX5 294 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 PGLYRP2Q96PD5 576 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 CCDC3Q9BQI4 270 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 EBF4Q9BQW3 602 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 LRTM1Q9HBL6 345 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 CNTN6Q9UQ52 1028 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 CARD8Q9Y2G2 431 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 CHST10O43529 356 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 RPP40O75818 363 aaKnown RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 SEMA3DO95025 777 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 OR6A2O95222 327 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 HNF4AP41235 474 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 PTPN9P43378 593 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 ACOX1Q15067 660 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 FAM171A1Q5VUB5 890 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 THOC7Q6I9Y2 204 aaKnown RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 MEIOBQ8N635 442 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 TOP6BLQ8N6T0 577 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 TOP1MTQ969P6 601 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 KCTD15Q96SI1 283 aaPredicted RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 TPK1Q9H3S4 243 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 ABHD16BQ9H3Z7 469 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 INTS10Q9NVR2 710 aaKnown RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 PCDHGA10Q9Y5H3 936 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 MRPL42Q9Y6G3 142 aaKnown RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 CXCL11O14625 94 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 UROSP10746 265 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 FAUP35544 74 aaKnown RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 MTAPQ13126 283 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 IL18Q14116 193 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 CARTPTQ16568 116 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 TAPT1Q6NXT6 567 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 DCLRE1AQ6PJP8 1040 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 CCDC185Q8N715 623 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 ZNF557Q8N988 423 aaPredicted RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 PCSK9Q8NBP7 692 aaKnown RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 DQX1Q8TE96 717 aaKnown RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 GAD1Q99259 594 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 CHCHD6Q9BRQ6 235 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 MTIF3Q9H2K0 278 aaKnown RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 GPN1Q9HCN4 374 aaPredicted RBP10.99□□□□□ -0.65
PBRM1-201ENST00000296302 PPM1HQ9ULR3 514 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 PMF1-BGLAPU3KQ54 211 aa10.99□□□□□ -0.65
PBRM1-201ENST00000296302 LRATO95237 230 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 PRKAG1P54619 331 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 PTPN5P54829 565 aa10.98□□□□□ -0.65
PBRM1-201ENST00000296302 MAXP61244 160 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms