RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 NT5DC3Q86UY8 548 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 TMTC1Q8IUR5 882 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 SDR16C5Q8N3Y7 309 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 FAM181AQ8N9Y4 354 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 FAM46DQ8NEK8 389 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 TFB1MQ8WVM0 346 aaKnown RBP9.74□□□□□ -0.85
CCDC58-201ENST00000291458 HNRNPLLQ8WVV9 542 aaKnown RBP9.74□□□□□ -0.85
CCDC58-201ENST00000291458 P3H4Q92791 437 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 NAF1Q96HR8 494 aaKnown RBP9.74□□□□□ -0.85
CCDC58-201ENST00000291458 RBM41Q96IZ5 413 aaKnown RBP9.74□□□□□ -0.85
CCDC58-201ENST00000291458 MRGPRX2Q96LB1 330 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 BAG1Q99933 345 aaPredicted RBP9.74□□□□□ -0.85
CCDC58-201ENST00000291458 HERPUD2Q9BSE4 406 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 LACRTQ9GZZ8 138 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 ZMYND15Q9H091 742 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 ABCG8Q9H221 673 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 DPEP2Q9H4A9 486 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 PRM3Q9NNZ6 103 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 SUFUQ9UMX1 484 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 PACSIN2Q9UNF0 486 aaPredicted RBP9.74□□□□□ -0.85
CCDC58-201ENST00000291458 PRKAB1Q9Y478 270 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 PLEKHM1Q9Y4G2 1056 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 GPSM3Q9Y4H4 160 aa9.74□□□□□ -0.85
CCDC58-201ENST00000291458 EPN1Q9Y6I3 576 aaPredicted RBP9.74□□□□□ -0.85
CCDC58-201ENST00000291458 EPG5Q9HCE0 2579 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 A0A0A6YYK5 440 aaPredicted RBP9.73□□□□□ -0.85
CCDC58-201ENST00000291458 EME2A4GXA9 379 aaPredicted RBP9.73□□□□□ -0.85
CCDC58-201ENST00000291458 ZNF487B1APH4 448 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 PSMD11O00231 422 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 TPP1O14773 563 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 ZRANB2O95218 330 aaKnown RBP eCLIP9.73□□□□□ -0.85
CCDC58-201ENST00000291458 LCA5LO95447 670 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 SOD1P00441 154 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 ATP1A1P05023 1023 aaKnown RBP9.73□□□□□ -0.85
CCDC58-201ENST00000291458 RPLP0P05388 317 aaKnown RBP9.73□□□□□ -0.85
CCDC58-201ENST00000291458 CTNNA2P26232 953 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 VAV2P52735 878 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 ILF3Q12906 894 aaKnown RBP eCLIP9.73□□□□□ -0.85
CCDC58-201ENST00000291458 BIRC2Q13490 618 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 SPIDRQ14159 915 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 PRKD1Q15139 912 aaPredicted RBP9.73□□□□□ -0.85
CCDC58-201ENST00000291458 PLA2G4EQ3MJ16 856 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 ZNF648Q5T619 568 aaPredicted RBP9.73□□□□□ -0.85
CCDC58-201ENST00000291458 RBM44Q6ZP01 1051 aaKnown RBP9.73□□□□□ -0.85
CCDC58-201ENST00000291458 TECPR1Q7Z6L1 1165 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 KATNAL2Q8IYT4 538 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 SLC25A41Q8N5S1 370 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 DCBLD1Q8N8Z6 715 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 PATE1Q8WXA2 126 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 NAT6Q93015 286 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 ATXN7L3BQ96GX2 97 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 CRELD1Q96HD1 420 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 OR2M4Q96R27 311 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 MLPHQ9BV36 600 aaPredicted RBP9.73□□□□□ -0.85
CCDC58-201ENST00000291458 FRMD8Q9BZ67 464 aaPredicted RBP9.73□□□□□ -0.85
CCDC58-201ENST00000291458 FOXP3Q9BZS1 431 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 USP29Q9HBJ7 922 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 GLOD4Q9HC38 313 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 EPB41L5Q9HCM4 733 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 PKD2L2Q9NZM6 624 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 NCKIPSDQ9NZQ3 722 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.73□□□□□ -0.85
CCDC58-201ENST00000291458 ZNF711Q9Y462 761 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 ADAMTS20P59510 1910 aa9.73□□□□□ -0.85
CCDC58-201ENST00000291458 KNTC1P50748 2209 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 TRBV23OR9-2A0A075B6M9 112 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 GRID2IPA4D2P6 1211 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 PDE2AO00408 941 aaPredicted RBP9.72□□□□□ -0.85
CCDC58-201ENST00000291458 TLX3O43711 291 aaPredicted RBP9.72□□□□□ -0.85
CCDC58-201ENST00000291458 FTCDO95954 541 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 FUCA1P04066 466 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 CAPNS1P04632 268 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 PTMAP06454 111 aaKnown RBP9.72□□□□□ -0.85
CCDC58-201ENST00000291458 CEACAM5P06731 702 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 GP1BAP07359 652 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 ZNF30P17039 623 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 CES1P23141 567 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 TRIM23P36406 574 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 ACTR1BP42025 376 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 CHRNA4P43681 627 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 HADHBP55084 474 aaKnown RBP9.72□□□□□ -0.85
CCDC58-201ENST00000291458 ACTR1AP61163 376 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 CCL7P80098 99 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 PTSQ03393 145 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 CCDC173Q0VFZ6 552 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 TCEAL1Q15170 157 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 COL28A1Q2UY09 1125 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 AMZ1Q400G9 498 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 CDCP2Q5VXM1 449 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 CRTC3Q6UUV7 619 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 B3GNT8Q7Z7M8 397 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 VSIG1Q86XK7 387 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 ZNF761Q86XN6 746 aaPredicted RBP9.72□□□□□ -0.85
CCDC58-201ENST00000291458 RCOR2Q8IZ40 523 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 CYP4X1Q8N118 509 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 IPMKQ8NFU5 416 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 CCHCR1Q8TD31 782 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 ZDHHC1Q8WTX9 485 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 FATE1Q969F0 183 aa9.72□□□□□ -0.85
CCDC58-201ENST00000291458 IMP4Q96G21 291 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms