RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 BOLA2-SMG1P6H3BVE0 249 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 J3QRK9 145 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 PSMD11O00231 422 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 CLDN11O75508 207 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 MSH3P20585 1137 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 PTGIRP43119 386 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 RABGGTBP53611 331 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 TAS2R40P59535 323 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 MAMLD1Q13495 774 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 SPANXN3Q5MJ09 141 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 MZT2BQ6NZ67 158 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 HIPK1Q86Z02 1210 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 DAW1Q8N136 415 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 CELF5Q8N6W0 485 aaKnown RBP11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 UXS1Q8NBZ7 420 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 ZNF461Q8TAF7 563 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 AUTS2Q8WXX7 1259 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 FBXL8Q96CD0 374 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 C19orf60Q96EN9 201 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 TEKT5Q96M29 485 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 SPATA7Q9P0W8 599 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 TMCC3Q9ULS5 477 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 F8W810 466 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 KATNA1O75449 491 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 CA3P07451 260 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 IDH2P48735 452 aaKnown RBP11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 THOP1P52888 689 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 LRRC32Q14392 662 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 UBXN2BQ14CS0 331 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 USP45Q70EL2 814 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 CBR4Q8N4T8 237 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 SPPL2AQ8TCT8 520 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 HERC2P3Q9BVR0 1158 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 ZDHHC18Q9NUE0 388 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 AKAP7Q9P0M2 348 aaPredicted RBP11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 DNAJB4Q9UDY4 337 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 RAD54BQ9Y620 910 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 KCNK1O00180 336 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 TOR1BO14657 336 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 WDR5P61964 334 aaKnown RBP11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 SQLEQ14534 574 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 LRRC26Q2I0M4 334 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 TYSND1Q2T9J0 566 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 ARMC12Q5T9G4 340 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 DNAJB7Q7Z6W7 309 aaPredicted RBP11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 ZNF605Q86T29 641 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 IFNLR1Q8IU57 520 aaPredicted RBP11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 PDPRQ8NCN5 879 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 ACE2Q9BYF1 805 aaPredicted RBP11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 CDHR5Q9HBB8 845 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 RAPGEFL1Q9UHV5 662 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 TRMT6Q9UJA5 497 aaKnown RBP11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 NDRG2Q9UN36 371 aaKnown RBP11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 PCDHGA3Q9Y5H0 932 aa11.35□□□□□ -0.59
NPC1L1-201ENST00000289547 IGKV6-21A0A0C4DH24 114 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 CST3P01034 146 aaPredicted RBP11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 DDX5P17844 614 aaKnown RBP11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 CORO1AP31146 461 aaKnown RBP11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 RRM2P31350 389 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 GNA12Q03113 381 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 RALGDSQ12967 914 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 BNIP3Q12983 259 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 GPR17Q13304 367 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 TRIM71Q2Q1W2 868 aaKnown RBP11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 PGS1Q32NB8 556 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 PLEKHG4Q58EX7 1191 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 VWA5B1Q5TIE3 1220 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 PKN3Q6P5Z2 889 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 NPNTQ6UXI9 565 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 FGD2Q7Z6J4 655 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 HS6ST3Q8IZP7 471 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 AHI1Q8N157 1196 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 SMYD1Q8NB12 490 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 LPGAT1Q92604 370 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 LENG8Q96PV6 779 aaPredicted RBP11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 POLR1EQ9GZS1 481 aaKnown RBP11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 CDH19Q9H159 772 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 ZDHHC6Q9H6R6 413 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 ZNF624Q9P2J8 865 aaPredicted RBP11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 GMPPBQ9Y5P6 360 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 ATP6AP2A0A1C7CYW4 349 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 MAGEB16A2A368 324 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 ATG13O75143 517 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 ATP6AP2O75787 350 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 OR6B1O95007 311 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 IL6P05231 212 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 ATF4P18848 351 aaPredicted RBP11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 SOAT1P35610 550 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 NPY2RP49146 381 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 CCDC157Q569K6 752 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 OFCC1Q8IZS5 231 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 SLC44A1Q8WWI5 657 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 CENPIQ92674 756 aaPredicted RBP11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 CELF6Q96J87 481 aaKnown RBP11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 WWOXQ9NZC7 414 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 FAM149AA5PLN7 773 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 SLC2A4P14672 509 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 CES1P23141 567 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 ERVK-21P61565 698 aa11.34□□□□□ -0.59
NPC1L1-201ENST00000289547 MSLNQ13421 630 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms