RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 MBL2P11226 248 aaPredicted RBP12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 GM2AP17900 193 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 FEN1P39748 380 aaKnown RBP12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 FCHO2Q0JRZ9 810 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 VPS26BQ4G0F5 336 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 TIGD5Q53EQ6 642 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 POTEHQ6S545 545 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 IL27RAQ6UWB1 636 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 LRRC49Q8IUZ0 686 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 SLC39A8Q9C0K1 460 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 RRAGCQ9HB90 399 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 ATP6V1HQ9UI12 483 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 SPEF1Q9Y4P9 236 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 DPYSL4O14531 572 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 TBX18O95935 607 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 PIK3CGP48736 1102 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 ALDH7A1P49419 539 aaKnown RBP12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 OGFOD2Q6N063 350 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 DCLRE1AQ6PJP8 1040 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 OFCC1Q8IZS5 231 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 UBR7Q8N806 425 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 NACC2Q96BF6 587 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 TADA1Q96BN2 335 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 ZYG11BQ9C0D3 744 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 LIN28AQ9H9Z2 209 aaKnown RBP12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 SLC8A2Q9UPR5 921 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 GMEB1Q9Y692 573 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 PTCH2Q9Y6C5 1203 aa12.53□□□□□ -0.4
SLC6A1-201ENST00000287766 TSPAN4O14817 238 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 FGF10O15520 208 aaPredicted RBP12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 SORBS2O94875 1100 aaKnown RBP12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 ALDH2P05091 517 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 CKMP06732 381 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 ITGAXP20702 1163 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 SLC1A2P43004 574 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 SOX4Q06945 474 aaPredicted RBP12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 TIGD2Q4W5G0 525 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 NOL9Q5SY16 702 aaKnown RBP12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 HECTD2Q5U5R9 776 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 MBLAC2Q68D91 279 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 USP50Q70EL3 339 aaPredicted RBP12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 VN1R5Q7Z5H4 357 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 DEFB128Q7Z7B8 93 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 ZNF605Q86T29 641 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 HERC6Q8IVU3 1022 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 COPS4Q9BT78 406 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 OSBPL10Q9BXB5 764 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 WDR12Q9GZL7 423 aaKnown RBP12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 C3orf18Q9UK00 162 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 U3KQV3 271 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 ARL5CA6NH57 179 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 J3QRK9 145 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 PLOD3O60568 738 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 KRT6AP02538 564 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 PRKCGP05129 697 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 LBPP18428 481 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 ATF4P18848 351 aaPredicted RBP12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 DLG1Q12959 904 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 NADK2Q4G0N4 442 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 KRT73Q86Y46 540 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 FBXL8Q96CD0 374 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 FCRL3Q96P31 734 aaPredicted RBP12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 ZFP14Q9HCL3 533 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 SIRPGQ9P1W8 387 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 ZDHHC2Q9UIJ5 367 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 PADI3Q9ULW8 664 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 SCN7AQ01118 1682 aa12.52□□□□□ -0.4
SLC6A1-201ENST00000287766 PAPPAQ13219 1627 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 AHDC1Q5TGY3 1603 aaPredicted RBP12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 URB1O60287 2271 aaKnown RBP12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 PSMD11O00231 422 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 DNAJA2O60884 412 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 ALDH4A1P30038 563 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 WEE1P30291 646 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 CLCN5P51795 746 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 TRAP1Q12931 704 aaKnown RBP12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 ZYG11AQ6WRX3 759 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 SPPL2CQ8IUH8 684 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 CRYBG2Q8N1P7 616 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 DMRTB1Q96MA1 342 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 RMND5AQ9H871 391 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 ACTR8Q9H981 624 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 DYRK4Q9NR20 520 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 KLHL1Q9NR64 748 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 IGSF9Q9P2J2 1179 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 KIAA1551Q9HCM1 1747 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 IPO13O94829 963 aaKnown RBP12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 AHSGP02765 367 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 FGF3P11487 239 aaPredicted RBP12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 MSLNQ13421 630 aaPredicted RBP12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 QPRTQ15274 297 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 PAOXQ6QHF9 649 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 RNF180Q86T96 592 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 EPHX4Q8IUS5 362 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 UBA2Q9UBT2 640 aaPredicted RBP12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 PRKAB1Q9Y478 270 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 LRRC42Q9Y546 428 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 GMPPBQ9Y5P6 360 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 COL1A2P08123 1366 aa12.52□□□□□ -0.41
SLC6A1-201ENST00000287766 MEIS3P2A8K0S8 358 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms