RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 GCAP28676 217 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 GCNT7Q6ZNI0 430 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 GPR141Q7Z602 305 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 FBXO22Q8NEZ5 403 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 OTULINQ96BN8 352 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 TMLHEQ9NVH6 421 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 TMEM161AQ9NX61 479 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 GIMAP2Q9UG22 337 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 SSC5DA1L4H1 1573 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.3□□□□□ -0.12
TMEM47-201ENST00000275954 BDP1A6H8Y1 2624 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 TAF1LQ8IZX4 1826 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 FAM155AB1AL88 458 aaPredicted RBP14.3□□□□□ -0.12
TMEM47-201ENST00000275954 ULK1O75385 1050 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 PRKG2Q13237 762 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 GRAMD4Q6IC98 578 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 CGB2Q6NT52 195 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 PAQR3Q6TCH7 311 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 UBR7Q8N806 425 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 RIN3Q8TB24 985 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 ITFG1Q8TB96 612 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 TWIST2Q8WVJ9 160 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 SMG7Q92540 1137 aaKnown RBP14.3□□□□□ -0.12
TMEM47-201ENST00000275954 TMEM159Q96B96 161 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 OSGEPL1Q9H4B0 414 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 PSMD13Q9UNM6 376 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 ANKRD31Q8N7Z5 1873 aa14.3□□□□□ -0.12
TMEM47-201ENST00000275954 KIAA1551Q9HCM1 1747 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 PRMT5O14744 637 aaPredicted RBP14.29□□□□□ -0.12
TMEM47-201ENST00000275954 ADH1AP07327 375 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 FGF3P11487 239 aaPredicted RBP14.29□□□□□ -0.12
TMEM47-201ENST00000275954 TYMPP19971 482 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 MSH3P20585 1137 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 PPIGQ13427 754 aaKnown RBP eCLIP14.29□□□□□ -0.12
TMEM47-201ENST00000275954 KIAA0930Q6ICG6 404 aaPredicted RBP14.29□□□□□ -0.12
TMEM47-201ENST00000275954 LRRTM3Q86VH5 581 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 SPPL2CQ8IUH8 684 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 C3orf58Q8NDZ4 430 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 OSBPL2Q9H1P3 480 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 MOCS1Q9NZB8 636 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 PRPF19Q9UMS4 504 aaKnown RBP14.29□□□□□ -0.12
TMEM47-201ENST00000275954 C5orf58C9J3I9 102 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 SNAP91O60641 907 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 TNFAIP8O95379 198 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 HAPLN1P10915 354 aaPredicted RBP14.29□□□□□ -0.12
TMEM47-201ENST00000275954 MYOGP15173 224 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 ACTR3P61158 418 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 TRIP4Q15650 581 aaPredicted RBP14.29□□□□□ -0.12
TMEM47-201ENST00000275954 UPP1Q16831 310 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 AP5B1Q2VPB7 878 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 PABPC1LQ4VXU2 614 aaKnown RBP14.29□□□□□ -0.12
TMEM47-201ENST00000275954 KIAA0408Q6ZU52 694 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 CLVS1Q8IUQ0 354 aaPredicted RBP14.29□□□□□ -0.12
TMEM47-201ENST00000275954 SLC22A17Q8WUG5 538 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 MPP4Q96JB8 637 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 ASB2Q96Q27 587 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 SYNDIG1Q9H7V2 258 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 EBF2Q9HAK2 575 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 CLDND1Q9NY35 253 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 TBC1D3BA6NDS4 549 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 XRCC1P18887 633 aaPredicted RBP14.29□□□□□ -0.12
TMEM47-201ENST00000275954 CHN2P52757 468 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 THOP1P52888 689 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 IRF8Q02556 426 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 COL9A2Q14055 689 aaPredicted RBP14.29□□□□□ -0.12
TMEM47-201ENST00000275954 LPCAT2Q7L5N7 544 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 ZNF366Q8N895 744 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 MCOLN3Q8TDD5 553 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 LNPEPQ9UIQ6 1025 aa14.29□□□□□ -0.12
TMEM47-201ENST00000275954 NIPSNAP2O75323 286 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 UGT2B4P06133 528 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 CA3P07451 260 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 VCLP18206 1134 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 POU1F1P28069 291 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 AQP4P55087 323 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 CDC16Q13042 620 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 C6orf52Q5T4I8 152 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 TXNDC8Q6A555 127 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 P3H2Q8IVL5 708 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 DHRSXQ8N5I4 330 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 ATG16L2Q8NAA4 619 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 ZNF570Q96NI8 536 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 MIPEPQ99797 713 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 EBF3Q9H4W6 596 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 ASAH2Q9NR71 780 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 CFAP97Q9P2B7 532 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 INVSQ9Y283 1065 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 C16orf96A6NNT2 1141 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 H3BMM5 538 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 PIP5K1BO14986 540 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 DCLK1O15075 740 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 DEAF1O75398 565 aaPredicted RBP14.28□□□□□ -0.12
TMEM47-201ENST00000275954 SLC25A14O95258 325 aaPredicted RBP14.28□□□□□ -0.12
TMEM47-201ENST00000275954 C8AP07357 584 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 CNPP09543 421 aaKnown RBP14.28□□□□□ -0.12
TMEM47-201ENST00000275954 DGKAP23743 735 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 GSTT1P30711 240 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 S100A3P33764 101 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 GGT5P36269 586 aa14.28□□□□□ -0.12
TMEM47-201ENST00000275954 HSPA7P48741 367 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms