RNA–Protein interactions for RNA: ENST00000275300.2

SLC22A3-201, Transcript of solute carrier family 22 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A3, Length 3,348 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A3-201ENST00000275300 TBC1D13Q9NVG8 400 aa17.11■□□□□ 0.33
SLC22A3-201ENST00000275300 EIF2B4Q9UI10 523 aaKnown RBP17.11■□□□□ 0.33
SLC22A3-201ENST00000275300 A0A0G2JMZ2 1700 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 LRRC37A2A6NM11 1700 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 HSPA8P11142 646 aaKnown RBP17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 CD1DP15813 335 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 PYCR3Q53H96 274 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 ZRANB3Q5FWF4 1079 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 CNTN4Q8IWV2 1026 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 FBXO39Q8N4B4 442 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 LPCAT1Q8NF37 534 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 PTTG2Q9NZH5 202 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 FAM8A1Q9UBU6 413 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 AASSQ9UDR5 926 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 DMTF1Q9Y222 760 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 CBX4O00257 560 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 ARPC2O15144 300 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 CLOCKO15516 846 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 CNPP09543 421 aaKnown RBP17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 SLC7A1P30825 629 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 LEPRP48357 1165 aaKnown RBP17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 CLCN5P51795 746 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 ADARP55265 1226 aaKnown RBP17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 TBPL2Q6SJ96 375 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 CD300LGQ6UXG3 332 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 LGI2Q8N0V4 545 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 FNDC5Q8NAU1 212 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 OR52B6Q8NGF0 335 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 IMP4Q96G21 291 aaKnown RBP17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 UBXN10Q96LJ8 280 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 NSMCE3Q96MG7 304 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 RBM38Q9H0Z9 239 aaKnown RBP17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 ADNPQ9H2P0 1102 aa17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 POLR3BQ9NW08 1133 aaPredicted RBP17.1■□□□□ 0.33
SLC22A3-201ENST00000275300 PSMD3O43242 534 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 OR4F21O95013 312 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 PEX11BO96011 259 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 NFKBIAP25963 317 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 ELK4P28324 431 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 AIF1P55008 147 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 HERVK_113P63132 956 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 TMEM26Q6ZUK4 368 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 RAB44Q7Z6P3 723 aaPredicted RBP17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 PCYOX1LQ8NBM8 494 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 PDZD8Q8NEN9 1154 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 TSGA13Q96PP4 275 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 ERVK-6Q9BXR3 956 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 ZYG11BQ9C0D3 744 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 CSNK1G1Q9HCP0 422 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 CD274Q9NZQ7 290 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 SUCOQ9UBS9 1254 aaKnown RBP17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 U3KQV3 271 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 KLHL33A6NCF5 533 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 RPL17P18621 184 aaKnown RBP17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 GDF5P43026 501 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 CLCQ05315 142 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 LAPTM4AQ15012 233 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 FAM110CQ1W6H9 321 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 SLC44A4Q53GD3 710 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 FAM171BQ6P995 826 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 TRPV1Q8NER1 839 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 ITCHQ96J02 903 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 ZFRQ96KR1 1074 aaKnown RBP17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 ZNF696Q9H7X3 374 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 POLR1BQ9H9Y6 1135 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 VPS45Q9NRW7 570 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 SMPD4Q9NXE4 827 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 MARCH2Q9P0N8 246 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 TMEM181Q9P2C4 612 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 PLXNA1Q9UIW2 1896 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 A0A1W2PPW3 197 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 NDUFS3O75489 264 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 KCNH1O95259 989 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 MTHFD2P13995 350 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 SLC6A2P23975 617 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 CSRP3P50461 194 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 HPCAP84074 193 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 LIPEQ05469 1076 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 MAPRE2Q15555 327 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 TIGD7Q6NT04 549 aaPredicted RBP17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 PIANPQ8IYJ0 282 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 CALML6Q8TD86 181 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 LRRC58Q96CX6 371 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 TSPAN17Q96FV3 270 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 HAUS8Q9BT25 410 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 CD300AQ9UGN4 299 aa17.09■□□□□ 0.33
SLC22A3-201ENST00000275300 ECI2O75521 394 aa17.08■□□□□ 0.33
SLC22A3-201ENST00000275300 HOXD8P13378 290 aaPredicted RBP17.08■□□□□ 0.33
SLC22A3-201ENST00000275300 CTPS1P17812 591 aa17.08■□□□□ 0.33
SLC22A3-201ENST00000275300 IL10P22301 178 aa17.08■□□□□ 0.33
SLC22A3-201ENST00000275300 PSMA4P25789 261 aaKnown RBP17.08■□□□□ 0.33
SLC22A3-201ENST00000275300 HUNKP57058 714 aa17.08■□□□□ 0.33
SLC22A3-201ENST00000275300 TIAL1Q01085 375 aaKnown RBP eCLIP17.08■□□□□ 0.33
SLC22A3-201ENST00000275300 KCTD14Q9BQ13 255 aaPredicted RBP17.08■□□□□ 0.33
SLC22A3-201ENST00000275300 HGH1Q9BTY7 390 aa17.08■□□□□ 0.33
SLC22A3-201ENST00000275300 ADI1Q9BV57 179 aa17.08■□□□□ 0.33
SLC22A3-201ENST00000275300 GKN1Q9NS71 199 aa17.08■□□□□ 0.33
SLC22A3-201ENST00000275300 CATSPERZQ9NTU4 200 aa17.08■□□□□ 0.33
SLC22A3-201ENST00000275300 UTS2RQ9UKP6 389 aa17.08■□□□□ 0.33
SLC22A3-201ENST00000275300 A0A1W2PQ67 120 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms