RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 MSLNQ13421 630 aaPredicted RBP17.81■□□□□ 0.44
SEC22C-202ENST00000273156 GALNT3Q14435 633 aa17.81■□□□□ 0.44
SEC22C-202ENST00000273156 MMAAQ8IVH4 418 aaKnown RBP17.81■□□□□ 0.44
SEC22C-202ENST00000273156 GABPB2Q8TAK5 448 aaPredicted RBP17.81■□□□□ 0.44
SEC22C-202ENST00000273156 BRSK1Q8TDC3 778 aa17.81■□□□□ 0.44
SEC22C-202ENST00000273156 SNX19Q92543 992 aa17.81■□□□□ 0.44
SEC22C-202ENST00000273156 ZNF778Q96MU6 729 aa17.81■□□□□ 0.44
SEC22C-202ENST00000273156 CPNE1Q99829 537 aa17.81■□□□□ 0.44
SEC22C-202ENST00000273156 CAPS2Q9BXY5 557 aa17.81■□□□□ 0.44
SEC22C-202ENST00000273156 TM6SF2Q9BZW4 377 aa17.81■□□□□ 0.44
SEC22C-202ENST00000273156 CEP44Q9C0F1 390 aa17.81■□□□□ 0.44
SEC22C-202ENST00000273156 C6orf106Q9H6K1 298 aaPredicted RBP17.81■□□□□ 0.44
SEC22C-202ENST00000273156 KCNK9Q9NPC2 374 aa17.81■□□□□ 0.44
SEC22C-202ENST00000273156 NSMCE4AQ9NXX6 385 aa17.81■□□□□ 0.44
SEC22C-202ENST00000273156 RNASEH2AO75792 299 aaKnown RBP17.8■□□□□ 0.44
SEC22C-202ENST00000273156 CD27P26842 260 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 SLC8A1P32418 973 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 GRIK2Q13002 908 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 ATXN7L2Q5T6C5 722 aaPredicted RBP17.8■□□□□ 0.44
SEC22C-202ENST00000273156 TSTD2Q5T7W7 516 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 TEDDM1Q5T9Z0 273 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 FAM46CQ5VWP2 391 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 ESRP1Q6NXG1 681 aaKnown RBP17.8■□□□□ 0.44
SEC22C-202ENST00000273156 PIP4P1Q86T03 277 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 OR2AP1Q8NGE2 309 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 PTPRN2Q92932 1015 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 PEX13Q92968 403 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 NSMCE3Q96MG7 304 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 MTG2Q9H4K7 406 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 TREX1Q9NSU2 369 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 CCDC78A2IDD5 438 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 MID1O15344 667 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 UGT1A9O60656 530 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 FAM155BO75949 473 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 ZNF883P0CG24 379 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 GP5P40197 560 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 MDH1P40925 334 aaKnown RBP17.8■□□□□ 0.44
SEC22C-202ENST00000273156 BCL2L1Q07817 233 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 CNGA3Q16281 694 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 ACCSLQ4AC99 568 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 HSP90AA5PQ58FG0 334 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 GRTP1Q5TC63 336 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 KIAA0930Q6ICG6 404 aaPredicted RBP17.8■□□□□ 0.44
SEC22C-202ENST00000273156 PACS1Q6VY07 963 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 RYBPQ8N488 228 aaPredicted RBP17.8■□□□□ 0.44
SEC22C-202ENST00000273156 PCDH20Q8N6Y1 951 aaKnown RBP17.8■□□□□ 0.44
SEC22C-202ENST00000273156 DEFB124Q8NES8 71 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 C1orf216Q8TAB5 229 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 BLOC1S5Q8TDH9 187 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 PDCD6IPQ8WUM4 868 aaKnown RBP17.8■□□□□ 0.44
SEC22C-202ENST00000273156 OR8D1Q8WZ84 308 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 SKA1Q96BD8 255 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 ALKBH8Q96BT7 664 aaKnown RBP17.8■□□□□ 0.44
SEC22C-202ENST00000273156 BIRC7Q96CA5 298 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 FAM129BQ96TA1 746 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 UGT1A7Q9HAW7 530 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 UGT1A10Q9HAW8 530 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 UGT1A8Q9HAW9 530 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 FSCN3Q9NQT6 498 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 PSD3Q9NYI0 1048 aa17.8■□□□□ 0.44
SEC22C-202ENST00000273156 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.8■□□□□ 0.44
SEC22C-202ENST00000273156 TNRC6BQ9UPQ9 1833 aaKnown RBP17.79■□□□□ 0.44
SEC22C-202ENST00000273156 A0A1W2PPM1 405 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 MROH6A6NGR9 719 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 FOXO6A8MYZ6 492 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 ANKRD66B4E2M5 251 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 FSBPO95073 299 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 VAPBO95292 243 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 CRTAMO95727 393 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 GSRP00390 522 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 PRLP01236 227 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 IL1BP01584 269 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 GRIA4P48058 902 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 STK19P49842 368 aaPredicted RBP17.79■□□□□ 0.44
SEC22C-202ENST00000273156 TRAF2Q12933 501 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 DNAJC3Q13217 504 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 THOC5Q13769 683 aaKnown RBP17.79■□□□□ 0.44
SEC22C-202ENST00000273156 ARMC12Q5T9G4 340 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 KIAA0895LQ68EN5 471 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 STK40Q8N2I9 435 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 LPCAT1Q8NF37 534 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 OR2T34Q8NGX1 318 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 FRS2Q8WU20 508 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 MZB1Q8WU39 189 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 ATP13A3Q9H7F0 1226 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 SSU72Q9NP77 194 aaKnown RBP17.79■□□□□ 0.44
SEC22C-202ENST00000273156 IARS2Q9NSE4 1012 aaKnown RBP17.79■□□□□ 0.44
SEC22C-202ENST00000273156 IL1RAPL1Q9NZN1 696 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 RIMKLBQ9ULI2 386 aa17.79■□□□□ 0.44
SEC22C-202ENST00000273156 MUC22E2RYF6 1773 aaPredicted RBP17.79■□□□□ 0.44
SEC22C-202ENST00000273156 CEP295Q9C0D2 2601 aa17.78■□□□□ 0.44
SEC22C-202ENST00000273156 A0A1W2PP55 124 aa17.78■□□□□ 0.44
SEC22C-202ENST00000273156 TMEM120BA0PK00 339 aa17.78■□□□□ 0.44
SEC22C-202ENST00000273156 TRIM49D1C9J1S8 452 aa17.78■□□□□ 0.44
SEC22C-202ENST00000273156 SLC7A4O43246 635 aa17.78■□□□□ 0.44
SEC22C-202ENST00000273156 SOCS5O75159 536 aa17.78■□□□□ 0.44
SEC22C-202ENST00000273156 ZNF821O75541 412 aaPredicted RBP17.78■□□□□ 0.44
SEC22C-202ENST00000273156 CREB1P16220 341 aa17.78■□□□□ 0.44
SEC22C-202ENST00000273156 KRT4P19013 534 aa17.78■□□□□ 0.44
SEC22C-202ENST00000273156 PSMD8P48556 350 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms