RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 RBM12Q9NTZ6 932 aaKnown RBP13.23□□□□□ -0.29
PRDM16-201ENST00000270722 DEC1Q9P2X7 70 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 DNAJC16Q9Y2G8 782 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 VIPP01282 170 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 ITPKBP27987 946 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 SLC39A12Q504Y0 691 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 HSDL2Q6YN16 418 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 CYP2U1Q7Z449 544 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 DNAJB3Q8WWF6 145 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 RNF145Q96MT1 663 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 CLEC4AQ9UMR7 237 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 FCHO1O14526 889 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 PNPP00491 289 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 PRNPP04156 253 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 HSD3B2P26439 372 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 ADSSP30520 456 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 ETV1P50549 477 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 ACVR2BQ13705 512 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 DNAJB7Q7Z6W7 309 aaPredicted RBP13.23□□□□□ -0.29
PRDM16-201ENST00000270722 PTCD2Q8WV60 388 aaKnown RBP13.23□□□□□ -0.29
PRDM16-201ENST00000270722 PTCD3Q96EY7 689 aaKnown RBP13.23□□□□□ -0.29
PRDM16-201ENST00000270722 VPS45Q9NRW7 570 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 M0R036 132 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 CDH13P55290 713 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 SLC22A8Q8TCC7 542 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 EBNA1BP2Q99848 306 aaKnown RBP13.23□□□□□ -0.29
PRDM16-201ENST00000270722 ADAM2Q99965 735 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 TRMUO75648 421 aaKnown RBP13.23□□□□□ -0.29
PRDM16-201ENST00000270722 GNAO1P09471 354 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 ATP5A1P25705 553 aaKnown RBP13.23□□□□□ -0.29
PRDM16-201ENST00000270722 ELOAQ14241 798 aaKnown RBP13.23□□□□□ -0.29
PRDM16-201ENST00000270722 AAK1Q2M2I8 961 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 WDR93Q6P2C0 686 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 FOXR1Q6PIV2 292 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 FUKQ8N0W3 1084 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 ZFAND2BQ8WV99 257 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 PDLIM2Q96JY6 352 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 IL12RB2Q99665 862 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 GPATCH1Q9BRR8 931 aaKnown RBP13.23□□□□□ -0.29
PRDM16-201ENST00000270722 AGO4Q9HCK5 861 aaKnown RBP13.23□□□□□ -0.29
PRDM16-201ENST00000270722 GNEQ9Y223 722 aaKnown RBP13.23□□□□□ -0.29
PRDM16-201ENST00000270722 PTCH2Q9Y6C5 1203 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 NEXMIFQ5QGS0 1516 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 CNTNAP5Q8WYK1 1306 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 APOC4-APOC2K7ER74 178 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 APOC2P02655 101 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 SBK2P0C263 348 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 POLD2P49005 469 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 C8orf59Q8N0T1 100 aaPredicted RBP13.23□□□□□ -0.29
PRDM16-201ENST00000270722 HDAC7Q8WUI4 952 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 MTMR8Q96EF0 704 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 CORO1BQ9BR76 489 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 TLE6Q9H808 572 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 HPF1Q9NWY4 346 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 HAO1Q9UJM8 370 aa13.23□□□□□ -0.29
PRDM16-201ENST00000270722 LEF1Q9UJU2 399 aaPredicted RBP13.23□□□□□ -0.29
PRDM16-201ENST00000270722 ZSCAN5BA6NJL1 495 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 HSBP1L1C9JCN9 74 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 J3QR89 54 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 YBX3P16989 372 aaKnown RBP eCLIP13.22□□□□□ -0.29
PRDM16-201ENST00000270722 IDSP22304 550 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 PON1P27169 355 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 SDC2P34741 201 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 HSPA14Q0VDF9 509 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 LAPTM5Q13571 262 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 TRMOQ9BU70 441 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 IL1RAPQ9NPH3 570 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 CALML5Q9NZT1 146 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 TBC1D24Q9ULP9 559 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 NOX1Q9Y5S8 564 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 PER2O15055 1255 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 SLC1A6P48664 564 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 FOXO4P98177 505 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 PLEKHG6Q3KR16 790 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 HYIQ5T013 277 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 ZNF697Q5TEC3 545 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 NIPAL1Q6NVV3 410 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 PIWIL4Q7Z3Z4 852 aaKnown RBP13.22□□□□□ -0.29
PRDM16-201ENST00000270722 RHBGQ9H310 441 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 FAM105AQ9NUU6 356 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 DDX20Q9UHI6 824 aaKnown RBP13.22□□□□□ -0.29
PRDM16-201ENST00000270722 TBC1D3DA0A087WVF3 549 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 TBC1D3IA0A087WXS9 549 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 TBC1D3EA0A087X179 549 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 TBC1D3KA0A087X1G2 549 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 TBC1D3FA6NER0 549 aaPredicted RBP13.22□□□□□ -0.29
PRDM16-201ENST00000270722 TBC1D3LB9A6J9 549 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 GRM6O15303 877 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 KERAO60938 352 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 TBC1D3HP0C7X1 549 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 EPORP19235 508 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 WDR45BQ5MNZ6 344 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 TBC1D3GQ6DHY5 549 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 TBC1D3CQ6IPX1 549 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 TBC1D3Q8IZP1 549 aaPredicted RBP13.22□□□□□ -0.29
PRDM16-201ENST00000270722 NAT14Q8WUY8 206 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 APBA2Q99767 749 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 A0A096LPK6 155 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 SLC28A2O43868 658 aa13.22□□□□□ -0.29
PRDM16-201ENST00000270722 ATG13O75143 517 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms