RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ZIK1Q3SY52 487 aaPredicted RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 RBM20Q5T481 1227 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 HECTD2Q5U5R9 776 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 DENND5AQ6IQ26 1287 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 RPS27LQ71UM5 84 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 ZDHHC13Q8IUH4 622 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 RIMKLAQ8IXN7 391 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 DNAJB14Q8TBM8 379 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 DCPSQ96C86 337 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 FSD1LQ9BXM9 530 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 ALG9Q9H6U8 611 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 WDR6Q9NNW5 1121 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 FBXO8Q9NRD0 319 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 UBQLN1Q9UMX0 589 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 ST14Q9Y5Y6 855 aa12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 OAS3Q9Y6K5 1087 aaKnown RBP12.35□□□□□ -0.43
CHMP2B-201ENST00000263780 GRXCR2A6NFK2 248 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 PIP5K1BO14986 540 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 SPTLC1O15269 473 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 ARIH2O95376 493 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 RAP2AP10114 183 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 LMO2P25791 158 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 SERPINB1P30740 379 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 FXNQ16595 210 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 LDLRAP1Q5SW96 308 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 KANK2Q63ZY3 851 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 TBPL2Q6SJ96 375 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 STK32CQ86UX6 486 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 OR7A2PQ8NGA2 310 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 SPATA22Q8NHS9 363 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 DPF3Q92784 378 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 FEM1AQ9BSK4 669 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 ANKHQ9HCJ1 492 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 MID1IP1Q9NPA3 183 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 SLC2A6Q9UGQ3 507 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 CCDC154A6NI56 674 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 H0Y858 1186 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 B4GAT1O43505 415 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 NDUFS2O75306 463 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 MYO1DO94832 1006 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 CDK14O94921 469 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 ENO2P09104 434 aaPredicted RBP12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 INSRRP14616 1297 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 NCK1P16333 377 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 SH3BP2P78314 561 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 ECT2LQ008S8 904 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 CHRNB3Q05901 458 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 CXCL9Q07325 125 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 GRB7Q14451 532 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 NBPF12Q5TAG4 269 aaPredicted RBP12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 SLC16A12Q6ZSM3 486 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 PHYKPLQ8IUZ5 450 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 B3GALNT2Q8NCR0 500 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 LRRC3Q9BY71 257 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 WDCPQ9H6R7 721 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 CPNE5Q9HCH3 593 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 SLC52A3Q9NQ40 469 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 TLR9Q9NR96 1032 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 OR12D3Q9UGF7 316 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 SUN2Q9UH99 717 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 SLC27A5Q9Y2P5 690 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 IFT52Q9Y366 437 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 PCDHB3Q9Y5E6 796 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 GPR45Q9Y5Y3 372 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 DGKBQ9Y6T7 804 aa12.34□□□□□ -0.43
CHMP2B-201ENST00000263780 LCTP09848 1927 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 ISPDA4D126 451 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 ZNF99A8MXY4 864 aaPredicted RBP12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 AREL1O15033 823 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 ADRA1AP35348 466 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 KPNA1P52294 538 aaPredicted RBP12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 EMX2Q04743 252 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 CD300CQ08708 224 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 AQP6Q13520 282 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 RCAN2Q14206 197 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 ACOX1Q15067 660 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 ZNF280DQ6N043 979 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 LBX2Q6XYB7 198 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 ADCK1Q86TW2 530 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 ISCA2Q86U28 154 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 ITIH5Q86UX2 942 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 SVOPLQ8N434 492 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 ATPAF2Q8N5M1 289 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 LINC01465Q8N7H1 131 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 SLC22A17Q8WUG5 538 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 TMBIM1Q969X1 311 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 NSMCE3Q96MG7 304 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 ZMAT2Q96NC0 199 aaKnown RBP12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 NODALQ96S42 347 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 UGT2B28Q9BY64 529 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 ATP13A3Q9H7F0 1226 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 SP140LQ9H930 580 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 PARVBQ9HBI1 364 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 FAM118AQ9NWS6 357 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 COMMD8Q9NX08 183 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 DDIT4Q9NX09 232 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 KLHL3Q9UH77 587 aa12.33□□□□□ -0.43
CHMP2B-201ENST00000263780 HCRTO43612 131 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 CRCPO75575 148 aa12.33□□□□□ -0.44
CHMP2B-201ENST00000263780 SOAT2O75908 522 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms