RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 PNCKQ6P2M8 343 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 HEATR4Q86WZ0 1026 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 OR4K2Q8NGD2 314 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 RUNDC3BQ96NL0 473 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 LGR4Q9BXB1 951 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 IL21RQ9HBE5 538 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 PSD3Q9NYI0 1048 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 IL17CQ9P0M4 197 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 HS3ST3A1Q9Y663 406 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 ZFC3H1O60293 1989 aaKnown RBP18.26■□□□□ 0.51
SDF4-201ENST00000263741 DNALI1O14645 258 aaPredicted RBP18.26■□□□□ 0.51
SDF4-201ENST00000263741 SCAMP1O15126 338 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 GDF9O60383 454 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 MAGEA6P43360 314 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 ZNF140P52738 457 aaPredicted RBP18.26■□□□□ 0.51
SDF4-201ENST00000263741 NXPH1P58417 271 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 TAF1AQ15573 450 aaPredicted RBP18.26■□□□□ 0.51
SDF4-201ENST00000263741 ZNF542PQ5EBM4 170 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 HENMT1Q5T8I9 393 aaKnown RBP18.26■□□□□ 0.51
SDF4-201ENST00000263741 FAM151BQ6UXP7 276 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 RABEPKQ7Z6M1 372 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 NAT8LQ8N9F0 302 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 NOA1Q8NC60 698 aaKnown RBP18.26■□□□□ 0.51
SDF4-201ENST00000263741 BRSK1Q8TDC3 778 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 FAM122AQ96E09 287 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 DPH5Q9H2P9 285 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 FAM83DQ9H4H8 585 aa18.26■□□□□ 0.51
SDF4-201ENST00000263741 MGAT1P26572 445 aa18.25■□□□□ 0.51
SDF4-201ENST00000263741 PLA2G5P39877 138 aa18.25■□□□□ 0.51
SDF4-201ENST00000263741 GPR1P46091 355 aa18.25■□□□□ 0.51
SDF4-201ENST00000263741 RPL21P46778 160 aaKnown RBP18.25■□□□□ 0.51
SDF4-201ENST00000263741 IL9RQ01113 521 aa18.25■□□□□ 0.51
SDF4-201ENST00000263741 KIAA2013Q8IYS2 634 aa18.25■□□□□ 0.51
SDF4-201ENST00000263741 DNAJC1Q96KC8 554 aaKnown RBP18.25■□□□□ 0.51
SDF4-201ENST00000263741 APOOQ9BUR5 198 aa18.25■□□□□ 0.51
SDF4-201ENST00000263741 WDR26Q9H7D7 661 aa18.25■□□□□ 0.51
SDF4-201ENST00000263741 FKBPLQ9UIM3 349 aa18.25■□□□□ 0.51
SDF4-201ENST00000263741 PNMA8BQ9ULN7 279 aaPredicted RBP18.25■□□□□ 0.51
SDF4-201ENST00000263741 ARHGAP33O14559 1287 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 STX7O15400 261 aaKnown RBP18.24■□□□□ 0.51
SDF4-201ENST00000263741 LPOP22079 712 aaPredicted RBP18.24■□□□□ 0.51
SDF4-201ENST00000263741 CTSKP43235 329 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 RABIFP47224 123 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 VSNL1P62760 191 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 TCEA2Q15560 299 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 AASDHQ4L235 1098 aaPredicted RBP18.24■□□□□ 0.51
SDF4-201ENST00000263741 SYDE1Q6ZW31 735 aaPredicted RBP18.24■□□□□ 0.51
SDF4-201ENST00000263741 CAND1Q86VP6 1230 aaKnown RBP18.24■□□□□ 0.51
SDF4-201ENST00000263741 PPIL6Q8IXY8 311 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 NRSN1Q8IZ57 195 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 MPP5Q8N3R9 675 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 ZNF778Q96MU6 729 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 PWWP2AQ96N64 755 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 SRPK1Q96SB4 655 aaKnown RBP18.24■□□□□ 0.51
SDF4-201ENST00000263741 EDEM2Q9BV94 578 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 SPATA16Q9BXB7 569 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 GPR27Q9NS67 375 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 SYBUQ9NX95 663 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 SNX24Q9Y343 169 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 PKP3Q9Y446 797 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 C2orf81A6NN90 581 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 LRP3O75074 770 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 CRTAMO95727 393 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 CA5AP35218 305 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 THOP1P52888 689 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 SLC7A5Q01650 507 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 DPTQ07507 201 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 ZNF765Q7L2R6 523 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 SERPINB12Q96P63 405 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 TRIM56Q9BRZ2 755 aaKnown RBP18.24■□□□□ 0.51
SDF4-201ENST00000263741 SUDS3Q9H7L9 328 aaPredicted RBP18.24■□□□□ 0.51
SDF4-201ENST00000263741 IL26Q9NPH9 171 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 SLC2A6Q9UGQ3 507 aa18.24■□□□□ 0.51
SDF4-201ENST00000263741 GAPDHSO14556 408 aaPredicted RBP18.23■□□□□ 0.51
SDF4-201ENST00000263741 BANF1O75531 89 aa18.23■□□□□ 0.51
SDF4-201ENST00000263741 TSHRP16473 764 aa18.23■□□□□ 0.51
SDF4-201ENST00000263741 CDK3Q00526 305 aa18.23■□□□□ 0.51
SDF4-201ENST00000263741 FZD2Q14332 565 aa18.23■□□□□ 0.51
SDF4-201ENST00000263741 SMAD1Q15797 465 aaKnown RBP18.23■□□□□ 0.51
SDF4-201ENST00000263741 HLA-BQ31612 363 aa18.23■□□□□ 0.51
SDF4-201ENST00000263741 C8orf74Q6P047 294 aa18.23■□□□□ 0.51
SDF4-201ENST00000263741 DOK6Q6PKX4 331 aa18.23■□□□□ 0.51
SDF4-201ENST00000263741 ALYREFQ86V81 257 aaKnown RBP18.23■□□□□ 0.51
SDF4-201ENST00000263741 IQCHQ86VS3 1027 aa18.23■□□□□ 0.51
SDF4-201ENST00000263741 MINDY1Q8N5J2 469 aa18.23■□□□□ 0.51
SDF4-201ENST00000263741 PTCD2Q8WV60 388 aaKnown RBP18.23■□□□□ 0.51
SDF4-201ENST00000263741 MED4Q9NPJ6 270 aa18.23■□□□□ 0.51
SDF4-201ENST00000263741 GDF3Q9NR23 364 aa18.23■□□□□ 0.51
SDF4-201ENST00000263741 TMEM202A6NGA9 273 aa18.22■□□□□ 0.51
SDF4-201ENST00000263741 SPAM1P38567 509 aa18.22■□□□□ 0.51
SDF4-201ENST00000263741 ITGA8P53708 1063 aa18.22■□□□□ 0.51
SDF4-201ENST00000263741 DCDC1P59894 354 aa18.22■□□□□ 0.51
SDF4-201ENST00000263741 CDK16Q00536 496 aa18.22■□□□□ 0.51
SDF4-201ENST00000263741 NFATC4Q14934 902 aa18.22■□□□□ 0.51
SDF4-201ENST00000263741 TRADDQ15628 312 aa18.22■□□□□ 0.51
SDF4-201ENST00000263741 CHRNA6Q15825 494 aa18.22■□□□□ 0.51
SDF4-201ENST00000263741 ZNF648Q5T619 568 aaPredicted RBP18.22■□□□□ 0.51
SDF4-201ENST00000263741 LRRC8BQ6P9F7 803 aa18.22■□□□□ 0.51
SDF4-201ENST00000263741 AGGF1Q8N302 714 aaeCLIP18.22■□□□□ 0.51
SDF4-201ENST00000263741 SNF8Q96H20 258 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms