RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 CA5AP35218 305 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 SERPINB5P36952 375 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 VHLP40337 213 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 RPL14P50914 215 aaKnown RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 STC1P52823 247 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 RFTN1Q14699 578 aaPredicted RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 CBX2Q14781 532 aaPredicted RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 EPGNQ6UW88 154 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 SDCCAG8Q86SQ7 713 aaPredicted RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 RBM12BQ8IXT5 1001 aaKnown RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 SNX31Q8N9S9 440 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 ASAH2Q9NR71 780 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 ABCB8Q9NUT2 735 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 TAGLN3Q9UI15 199 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 SPECC1L-ADORA2AF8WAN1 911 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 PPP6CO00743 305 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 STX7O15400 261 aaKnown RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 HNRNPRO43390 633 aaKnown RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 TLL1O43897 1013 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 NIPSNAP2O75323 286 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 NDUFS3O75489 264 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 SRP72O76094 671 aaKnown RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 SORBS2O94875 1100 aaKnown RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 SIX3O95343 332 aaPredicted RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 GLUD1P00367 558 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 LPOP22079 712 aaPredicted RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 MAGEA8P43361 318 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 PDAP1Q13442 181 aaKnown RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 TAF1AQ15573 450 aaPredicted RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 OR4D1Q15615 310 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 PTPRNQ16849 979 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 PPM1LQ5SGD2 360 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 PAQR3Q6TCH7 311 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 RBM23Q86U06 439 aaKnown RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 TMEM25Q86YD3 366 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 APLFQ8IW19 511 aaPredicted RBP13.54□□□□□ -0.24
VMP1-201ENST00000262291 RDH11Q8TC12 318 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 WDR60Q8WVS4 1066 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 POF1BQ8WVV4 589 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 TSPAN17Q96FV3 270 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 UBXN10Q96LJ8 280 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 CATSPER2Q96P56 530 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 THTPAQ9BU02 230 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 ABCG8Q9H221 673 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 LINC00597Q9H2U6 94 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 MID2Q9UJV3 735 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 RAP2CQ9Y3L5 183 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 NCF1BA6NI72 391 aaPredicted RBP13.53□□□□□ -0.24
VMP1-201ENST00000262291 NCF1CA8MVU1 366 aaPredicted RBP13.53□□□□□ -0.24
VMP1-201ENST00000262291 UBXN8O00124 270 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 TRAFD1O14545 582 aaPredicted RBP13.53□□□□□ -0.24
VMP1-201ENST00000262291 NCF1P14598 390 aaPredicted RBP13.53□□□□□ -0.24
VMP1-201ENST00000262291 ITGB6P18564 788 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 FDXRP22570 491 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 ATP5F1P24539 256 aaPredicted RBP13.53□□□□□ -0.24
VMP1-201ENST00000262291 WEE1P30291 646 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 PGM1P36871 562 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 KPNB1Q14974 876 aaKnown RBP13.53□□□□□ -0.24
VMP1-201ENST00000262291 RALGPS1Q5JS13 557 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 SEL1L3Q68CR1 1132 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 KLC3Q6P597 504 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 ISCA2Q86U28 154 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 KBTBD2Q8IY47 623 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 GABPB2Q8TAK5 448 aaPredicted RBP13.53□□□□□ -0.24
VMP1-201ENST00000262291 ADGRE3Q9BY15 652 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 GPR63Q9BZJ6 419 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 STOML1Q9UBI4 398 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 PACSIN3Q9UKS6 424 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 GRXCR1A8MXD5 290 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 MATN2O00339 956 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 GFRA2O00451 464 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 EPCAMP16422 314 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 PFKPQ01813 784 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 LSM12Q3MHD2 195 aaKnown RBP13.53□□□□□ -0.24
VMP1-201ENST00000262291 DGKKQ5KSL6 1271 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 CLEC6AQ6EIG7 209 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 ASTLQ6HA08 431 aaPredicted RBP13.53□□□□□ -0.24
VMP1-201ENST00000262291 FAM45BPQ6NSW5 357 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 FAM151BQ6UXP7 276 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 ELMOD1Q8N336 334 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 NAT16Q8N8M0 369 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 FAM45AQ8TCE6 357 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 FAM161BQ96MY7 647 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 GCNAQ96QF7 691 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 GPR21Q99679 349 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 AARSD1Q9BTE6 412 aaKnown RBP13.53□□□□□ -0.24
VMP1-201ENST00000262291 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 DCLRE1BQ9H816 532 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 TCF7L2Q9NQB0 619 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 ATXN10Q9UBB4 475 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 INSL6Q9Y581 213 aa13.53□□□□□ -0.24
VMP1-201ENST00000262291 EFCAB14O75071 495 aa13.52□□□□□ -0.24
VMP1-201ENST00000262291 BAIAP3O94812 1187 aa13.52□□□□□ -0.24
VMP1-201ENST00000262291 SUPT7LO94864 414 aa13.52□□□□□ -0.24
VMP1-201ENST00000262291 ALOX15P16050 662 aaPredicted RBP13.52□□□□□ -0.24
VMP1-201ENST00000262291 POLD2P49005 469 aa13.52□□□□□ -0.24
VMP1-201ENST00000262291 HTRA4P83105 476 aaPredicted RBP13.52□□□□□ -0.24
VMP1-201ENST00000262291 TMEM240Q5SV17 173 aa13.52□□□□□ -0.24
VMP1-201ENST00000262291 C7orf61Q8IZ16 206 aa13.52□□□□□ -0.24
VMP1-201ENST00000262291 TTC30BQ8N4P2 665 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms