RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 AGBL2Q5U5Z8 902 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 TTC39BQ5VTQ0 682 aaPredicted RBP13.35□□□□□ -0.27
SGCA-201ENST00000262018 AFMIDQ63HM1 303 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 ARHGEF18Q6ZSZ5 1173 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 EFL1Q7Z2Z2 1120 aaKnown RBP13.35□□□□□ -0.27
SGCA-201ENST00000262018 ARHGAP12Q8IWW6 846 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 LGI2Q8N0V4 545 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 TAB3Q8N5C8 712 aaPredicted RBP13.35□□□□□ -0.27
SGCA-201ENST00000262018 RTL3Q8N8U3 475 aaKnown RBP13.35□□□□□ -0.27
SGCA-201ENST00000262018 CCNYQ8ND76 341 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 MCUQ8NE86 351 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 TTC17Q96AE7 1141 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 PRICKLE1Q96MT3 831 aaPredicted RBP13.35□□□□□ -0.27
SGCA-201ENST00000262018 TSGA13Q96PP4 275 aa13.35□□□□□ -0.27
SGCA-201ENST00000262018 GEMIN8Q9NWZ8 242 aaKnown RBP13.35□□□□□ -0.27
SGCA-201ENST00000262018 IGLV3-10A0A075B6K4 115 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 CCDC187A0A096LP49 1063 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.34□□□□□ -0.27
SGCA-201ENST00000262018 GOLGA6L10A6NI86 522 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 HMGB1P1B2RPK0 211 aaPredicted RBP13.34□□□□□ -0.27
SGCA-201ENST00000262018 GOLGA8MH3BSY2 632 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 POLR3GO15318 223 aaPredicted RBP13.34□□□□□ -0.27
SGCA-201ENST00000262018 NOBOXO60393 691 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 NEBLO76041 1014 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 METTL18O95568 372 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 ACSL3O95573 720 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 SLC5A2P31639 672 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 DRD3P35462 400 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 PDIA2Q13087 525 aaKnown RBP13.34□□□□□ -0.27
SGCA-201ENST00000262018 ZNF177Q13360 481 aaPredicted RBP13.34□□□□□ -0.27
SGCA-201ENST00000262018 AUHQ13825 339 aaKnown RBP13.34□□□□□ -0.27
SGCA-201ENST00000262018 CLCA4Q14CN2 919 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 SETMARQ53H47 684 aaPredicted RBP13.34□□□□□ -0.27
SGCA-201ENST00000262018 FNBP1LQ5T0N5 605 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 GUSBP11Q6P575 273 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 LRRC31Q6UY01 552 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 NLRP14Q86W24 1093 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 ZNF557Q8N988 423 aaPredicted RBP13.34□□□□□ -0.27
SGCA-201ENST00000262018 ATP6V1G3Q96LB4 118 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 C9orf72Q96LT7 481 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 DUSP23Q9BVJ7 150 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 ROPN1BQ9BZX4 212 aaPredicted RBP13.34□□□□□ -0.27
SGCA-201ENST00000262018 ROPN1Q9HAT0 212 aaPredicted RBP13.34□□□□□ -0.27
SGCA-201ENST00000262018 VPS18Q9P253 973 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 VANGL2Q9ULK5 521 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 ERVW-1Q9UQF0 538 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 ABCA12Q86UK0 2595 aa13.34□□□□□ -0.27
SGCA-201ENST00000262018 NBPF19A0A087WUL8 3843 aa13.33□□□□□ -0.27
SGCA-201ENST00000262018 DRGXA6NNA5 263 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 SCAMP1O15126 338 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 TCEA3O75764 348 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 TSHRP16473 764 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 RHOQP17081 205 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 PTPN3P26045 913 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 MZF1P28698 734 aaPredicted RBP13.33□□□□□ -0.28
SGCA-201ENST00000262018 CTSOP43234 321 aaPredicted RBP13.33□□□□□ -0.28
SGCA-201ENST00000262018 METAP1P53582 386 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 RPS24P62847 133 aaKnown RBP13.33□□□□□ -0.28
SGCA-201ENST00000262018 CYP4F2P78329 520 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 PARP6Q2NL67 630 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 KRT71Q3SY84 523 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 C5orf22Q49AR2 442 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 ZNF542PQ5EBM4 170 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 FBXL22Q6P050 247 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 TRIM69Q86WT6 500 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 LRRC49Q8IUZ0 686 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 MFN1Q8IWA4 741 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 CCDC13Q8IYE1 715 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 PDIK1LQ8N165 341 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 ZNF567Q8N184 647 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 RPRD1AQ96P16 312 aaPredicted RBP13.33□□□□□ -0.28
SGCA-201ENST00000262018 VAT1Q99536 393 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 ZYG11BQ9C0D3 744 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 KDM4CQ9H3R0 1056 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 EIF2B3Q9NR50 452 aaKnown RBP13.33□□□□□ -0.28
SGCA-201ENST00000262018 TMEM248Q9NWD8 314 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 DONSONQ9NYP3 566 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 ADAM21Q9UKJ8 722 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 INTS6Q9UL03 887 aaKnown RBP13.33□□□□□ -0.28
SGCA-201ENST00000262018 PCDHGA4Q9Y5G9 962 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 NYNRINQ9P2P1 1898 aaKnown RBP13.33□□□□□ -0.28
SGCA-201ENST00000262018 DOPEY1Q5JWR5 2465 aa13.33□□□□□ -0.28
SGCA-201ENST00000262018 COL27A1Q8IZC6 1860 aaPredicted RBP13.32□□□□□ -0.28
SGCA-201ENST00000262018 GOLGA6CA6NDK9 693 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 TCAF2A6NFQ2 919 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 SLC31A1O15431 190 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 PLRG1O43660 514 aaKnown RBP13.32□□□□□ -0.28
SGCA-201ENST00000262018 KRT38O76015 456 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 GOLGA6DP0CG33 693 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 CCNCP24863 283 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 CDK16Q00536 496 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 FASTKD3Q14CZ7 662 aaKnown RBP13.32□□□□□ -0.28
SGCA-201ENST00000262018 MSS51Q4VC12 460 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 MANEAQ5SRI9 462 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 FAM182AQ5T1J6 154 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 FAXCQ5TGI0 409 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 ZCCHC8Q6NZY4 707 aaKnown RBP13.32□□□□□ -0.28
SGCA-201ENST00000262018 VASH2Q86V25 355 aa13.32□□□□□ -0.28
SGCA-201ENST00000262018 CCDC117Q8IWD4 279 aaPredicted RBP13.32□□□□□ -0.28
SGCA-201ENST00000262018 ZBED8Q8IZ13 594 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms