RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 R3HDM2Q9Y2K5 976 aaKnown RBP12.07□□□□□ -0.48
COL8A1-201ENST00000261037 KCNE2Q9Y6J6 123 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 LRRC10BA6NIK2 292 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 TREHO43280 583 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 ECDO95905 644 aaPredicted RBP12.07□□□□□ -0.48
COL8A1-201ENST00000261037 ETS2P15036 469 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 CCT3P49368 545 aaKnown RBP12.07□□□□□ -0.48
COL8A1-201ENST00000261037 ZNF132P52740 706 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 SLC5A3P53794 718 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 HSDL1Q3SXM5 330 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 TRIM40Q6P9F5 258 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 SLC9A9Q8IVB4 645 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 C12orf56Q8IXR9 622 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 DCBLD1Q8N8Z6 715 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 GSTCDQ8NEC7 633 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 ACMSDQ8TDX5 336 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 ZHX1-C8orf76Q96EF9 292 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 APOLD1Q96LR9 279 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 TCF12Q99081 682 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 HSD17B14Q9BPX1 270 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 INTS7Q9NVH2 962 aaKnown RBP12.07□□□□□ -0.48
COL8A1-201ENST00000261037 RIPK3Q9Y572 518 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 RAI2Q9Y5P3 530 aa12.07□□□□□ -0.48
COL8A1-201ENST00000261037 TAF4O00268 1085 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 ERN1O75460 977 aaKnown RBP12.06□□□□□ -0.48
COL8A1-201ENST00000261037 RASGRP1O95267 797 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 TFPIP10646 304 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 TSHRP16473 764 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 AKT2P31751 481 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 CLCNKBP51801 687 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 NDUFA5Q16718 116 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 CPTPQ5TA50 214 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 IKBIPQ70UQ0 350 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 PIWIL4Q7Z3Z4 852 aaKnown RBP12.06□□□□□ -0.48
COL8A1-201ENST00000261037 MON1AQ86VX9 555 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.06□□□□□ -0.48
COL8A1-201ENST00000261037 PHYKPLQ8IUZ5 450 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 PYROXD2Q8N2H3 581 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 ZNF398Q8TD17 642 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 NXNL1Q96CM4 212 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 SUCOQ9UBS9 1254 aaKnown RBP12.06□□□□□ -0.48
COL8A1-201ENST00000261037 SORCS3Q9UPU3 1222 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 MAPRE3Q9UPY8 281 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 NR2E3Q9Y5X4 410 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 CLUHO75153 1309 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 FSCN2O14926 492 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 SERPINB7O75635 380 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 UGT2B17O75795 530 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 GNRH1P01148 92 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 PRKG2Q13237 762 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 PEX6Q13608 980 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 CCNYL2Q5T2Q4 361 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 CLEC6AQ6EIG7 209 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 ALG3Q92685 438 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 NOL11Q9H8H0 719 aaKnown RBP12.06□□□□□ -0.48
COL8A1-201ENST00000261037 MAP4K5Q9Y4K4 846 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 FAM92AA1XBS5 289 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 OR6C75A6NL08 312 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 OR2AG2A6NM03 316 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 C9JVG2 144 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 C1RP00736 705 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 STAT5AP42229 794 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 BRMS1LQ5PSV4 323 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 C9orf64Q5T6V5 341 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 ABHD15Q6UXT9 468 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 LMLNQ96KR4 655 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 CDADC1Q9BWV3 514 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 RAB23Q9ULC3 237 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 ZNF510Q9Y2H8 683 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 FCF1Q9Y324 198 aaKnown RBP12.06□□□□□ -0.48
COL8A1-201ENST00000261037 PLOD3O60568 738 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 RNASEH2AO75792 299 aaKnown RBP12.06□□□□□ -0.48
COL8A1-201ENST00000261037 CCNE2O96020 404 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 ALAS2P22557 587 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 INHBEP58166 350 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 CYP4F8P98187 520 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 PCBP1Q15365 356 aaKnown RBP eCLIP12.06□□□□□ -0.48
COL8A1-201ENST00000261037 C15orf52Q6ZUT6 534 aaKnown RBP12.06□□□□□ -0.48
COL8A1-201ENST00000261037 LRRC49Q8IUZ0 686 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 LRRC52Q8N7C0 313 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 PRRG4Q9BZD6 226 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 LRRC4CQ9HCJ2 640 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 CHRAC1Q9NRG0 131 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 RBM7Q9Y580 266 aaKnown RBP12.06□□□□□ -0.48
COL8A1-201ENST00000261037 SMIM28A0A1B0GU29 152 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 FPGTO14772 594 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 TMCC2O75069 709 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 APODP05090 189 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 CD48P09326 243 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 SMIM11AP58511 58 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 QPRTQ15274 297 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 CHSY3Q70JA7 882 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 CPA6Q8N4T0 437 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 ZNF248Q8NDW4 579 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 CLPTM1LQ96KA5 538 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 ABCG4Q9H172 646 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 TMEM51Q9NW97 253 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 COMMD9Q9P000 198 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 PSMD13Q9UNM6 376 aa12.06□□□□□ -0.48
COL8A1-201ENST00000261037 AP4B1Q9Y6B7 739 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms