RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 ORAI3Q9BRQ5 295 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 PKP3Q9Y446 797 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 GON4LQ3T8J9 2241 aa20.63■□□□□ 0.89
RTCA-201ENST00000260563 LDB2O43679 373 aa20.62■□□□□ 0.89
RTCA-201ENST00000260563 NMBRP28336 390 aa20.62■□□□□ 0.89
RTCA-201ENST00000260563 PI4KAP42356 2102 aa20.62■□□□□ 0.89
RTCA-201ENST00000260563 SPINT3P49223 89 aa20.62■□□□□ 0.89
RTCA-201ENST00000260563 LRRC14Q15048 493 aa20.62■□□□□ 0.89
RTCA-201ENST00000260563 ANKRD20A4Q4UJ75 823 aa20.62■□□□□ 0.89
RTCA-201ENST00000260563 LAIR1Q6GTX8 287 aa20.62■□□□□ 0.89
RTCA-201ENST00000260563 Q6ZVL8 140 aa20.62■□□□□ 0.89
RTCA-201ENST00000260563 NLRP9Q7RTR0 991 aa20.62■□□□□ 0.89
RTCA-201ENST00000260563 TECPR1Q7Z6L1 1165 aa20.62■□□□□ 0.89
RTCA-201ENST00000260563 TP53I13Q8NBR0 393 aaPredicted RBP20.62■□□□□ 0.89
RTCA-201ENST00000260563 ZNF778Q96MU6 729 aa20.62■□□□□ 0.89
RTCA-201ENST00000260563 FCRL3Q96P31 734 aaPredicted RBP20.62■□□□□ 0.89
RTCA-201ENST00000260563 VIPAS39Q9H9C1 493 aa20.62■□□□□ 0.89
RTCA-201ENST00000260563 CD84Q9UIB8 345 aa20.62■□□□□ 0.89
RTCA-201ENST00000260563 PLAAQ9Y263 795 aa20.62■□□□□ 0.89
RTCA-201ENST00000260563 TCRBV9S1A1TA0A576 114 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 CCDC78A2IDD5 438 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 RGSL1A5PLK6 1076 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 MROH6A6NGR9 719 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 MAP2K7O14733 419 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 EPN2O95208 641 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 LPOP22079 712 aaPredicted RBP20.61■□□□□ 0.89
RTCA-201ENST00000260563 STX2P32856 288 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 IRF4Q15306 451 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 TSTD2Q5T7W7 516 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 ALS2CLQ60I27 953 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 NRSN1Q8IZ57 195 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 IQCKQ8N0W5 287 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 TMEM145Q8NBT3 493 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.61■□□□□ 0.89
RTCA-201ENST00000260563 FBF1Q8TES7 1133 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 PIGKQ92643 395 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 SLC6A18Q96N87 628 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 ZIM3Q96PE6 472 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 KLF6Q99612 283 aaPredicted RBP20.61■□□□□ 0.89
RTCA-201ENST00000260563 BPIFA1Q9NP55 256 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 AASDHPPTQ9NRN7 309 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 RAD18Q9NS91 495 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 SUSD2Q9UGT4 822 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 FAM169AQ9Y6X4 670 aa20.61■□□□□ 0.89
RTCA-201ENST00000260563 ZCWPW2A0A1B0GU75 182 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 FPGTO14772 594 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 RAD51BO15315 384 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 STX7O15400 261 aaKnown RBP20.6■□□□□ 0.89
RTCA-201ENST00000260563 SASH3O75995 380 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 SHBGP04278 402 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 PCCBP05166 539 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 GNSP15586 552 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 RACK1P63244 317 aaKnown RBP20.6■□□□□ 0.89
RTCA-201ENST00000260563 ZNF765Q7L2R6 523 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 SYT12Q8IV01 421 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 PEX13Q92968 403 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 CENPTQ96BT3 561 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 AP2M1Q96CW1 435 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 TREX1Q9NSU2 369 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 IL17CQ9P0M4 197 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 RABGEF1Q9UJ41 708 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 PILRBQ9UKJ0 227 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 SLCO1B1Q9Y6L6 691 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 PLXNB3Q9ULL4 1909 aa20.6■□□□□ 0.89
RTCA-201ENST00000260563 BCAT2O15382 392 aaPredicted RBP20.59■□□□□ 0.89
RTCA-201ENST00000260563 ATP8B1O43520 1251 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 BUD23O43709 281 aaKnown RBP20.59■□□□□ 0.89
RTCA-201ENST00000260563 HOXD12P35452 270 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 IGFALSP35858 605 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 ZNF140P52738 457 aaPredicted RBP20.59■□□□□ 0.89
RTCA-201ENST00000260563 DCDC1P59894 354 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 STAT4Q14765 748 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 WSCD2Q2TBF2 565 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 PEAR1Q5VY43 1037 aaPredicted RBP20.59■□□□□ 0.89
RTCA-201ENST00000260563 ZDHHC20Q5W0Z9 365 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 ESRP1Q6NXG1 681 aaKnown RBP20.59■□□□□ 0.89
RTCA-201ENST00000260563 RFLNAQ6ZTI6 216 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 CYS1Q717R9 158 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 SUMF1Q8NBK3 374 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 OR2W6PQ8NHA6 318 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 CDH19Q9H159 772 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 ABCG8Q9H221 673 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 TM9SF3Q9HD45 589 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 MBNL1Q9NR56 388 aaKnown RBP20.59■□□□□ 0.89
RTCA-201ENST00000260563 MOCS1Q9NZB8 636 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 NFKBIL1Q9UBC1 381 aaPredicted RBP20.59■□□□□ 0.89
RTCA-201ENST00000260563 SLC2A6Q9UGQ3 507 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 GMEB2Q9UKD1 530 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 RIMKLBQ9ULI2 386 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 CA5BQ9Y2D0 317 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 KCTD3Q9Y597 815 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 PCDHGA5Q9Y5G8 931 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 NFS1Q9Y697 457 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 TMEM131Q92545 1883 aa20.59■□□□□ 0.89
RTCA-201ENST00000260563 BPIP17213 487 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 PAMP19021 973 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 SPAM1P38567 509 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 IFFO1Q0D2I5 559 aa20.58■□□□□ 0.89
RTCA-201ENST00000260563 FRG1Q14331 258 aaKnown RBP20.58■□□□□ 0.89
RTCA-201ENST00000260563 RAET1GQ6H3X3 334 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms