RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 NPAS2Q99743 824 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 LHX5Q9H2C1 402 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 A0A087X0B3 334 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 METTL21EPA6NDL7 271 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 GTPBP1O00178 669 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 RGL2O15211 777 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SPTLC1O15269 473 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 AMHP03971 560 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 TFEBP19484 476 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 HNF4AP41235 474 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 LSM3P62310 102 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ABATP80404 500 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 IL18R1Q13478 541 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 DET1Q7L5Y6 550 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 FAM47BQ8NA70 645 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SLC9A6Q92581 669 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ELL3Q9HB65 397 aaPredicted RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 KCNMB3Q9NPA1 279 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 TRPS1Q9UHF7 1281 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 TELO2Q9Y4R8 837 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PCDHGA10Q9Y5H3 936 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ABCC6O95255 1503 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 WNK3Q9BYP7 1800 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 A0A0J9YYE9 177 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 METTL18O95568 372 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 UROSP10746 265 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ALDH4A1P30038 563 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PTGS2P35354 604 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 HUNKP57058 714 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PAN2Q504Q3 1202 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ARMCX6Q7L4S7 300 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SIX5Q8N196 739 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 FAM98AQ8NCA5 519 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 OR2L5Q8NG80 312 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 GRIN3AQ8TCU5 1115 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 CENPNQ96H22 339 aaPredicted RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 MFSD14AQ96MC6 490 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 MTMR9Q96QG7 549 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ZNF180Q9UJW8 692 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PRDM4Q9UKN5 801 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 FADS3Q9Y5Q0 445 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 DGKBQ9Y6T7 804 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 TIPRLO75663 272 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 CELF2O95319 508 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 BDNFP23560 247 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ATP5C1P36542 298 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 MATKP42679 507 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ARF5P84085 180 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 LY6KQ17RY6 165 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PABPC1LQ4VXU2 614 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 REP15Q6BDI9 236 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 FAM117BQ6P1L5 589 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 INTS5Q6P9B9 1019 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 WDR59Q6PJI9 974 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 DOK6Q6PKX4 331 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PRR23BQ6ZRT6 265 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 CHST15Q7LFX5 561 aaPredicted RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SAPCD2Q86UD0 394 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 DEFB106AQ8N104 65 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ANKRD52Q8NB46 1076 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 TAMM41Q96BW9 452 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SP140LQ9H930 580 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 POLLQ9UGP5 575 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PPIEQ9UNP9 301 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 NRCAMQ92823 1304 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 IQCMA0A1B0GVH7 501 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 FADS2P1A8MWK0 482 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 GCATO75600 419 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 FGF19O95750 216 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SHMT1P34896 483 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 CTSKP43235 329 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 RORCP51449 518 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 RAPSNQ13702 412 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SLC26A9Q7LBE3 791 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 GPALPP1Q8IXQ4 340 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 OR8H3Q8N146 312 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 INO80EQ8NBZ0 244 aaPredicted RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PPCDCQ96CD2 204 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 HSFY1Q96LI6 401 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 RNF157Q96PX1 679 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PLK2Q9NYY3 685 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 PRMT3O60678 531 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 IFNA6P05013 189 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 MYBL2P10244 700 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ETS2P15036 469 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 MANFP55145 182 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 SOX10P56693 466 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 RPL19P84098 196 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 ADGRA1Q86SQ6 560 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 HPS6Q86YV9 775 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 GPR156Q8NFN8 814 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 KBTBD7Q8WVZ9 684 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 CLP1Q92989 425 aaKnown RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 OMDQ99983 421 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 IFT46Q9NQC8 304 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 GIN1Q9NXP7 522 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 STOX2Q9P2F5 926 aaPredicted RBP4.79□□□□□ -1.64
RC3H1-201ENST00000258349 MGAT4AQ9UM21 535 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 GIT1Q9Y2X7 761 aa4.79□□□□□ -1.64
RC3H1-201ENST00000258349 DERAQ9Y315 318 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms