RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 KATNBL1Q9H079 304 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 NTN4Q9HB63 628 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 INTS7Q9NVH2 962 aaKnown RBP13.37□□□□□ -0.27
H3F3B-201ENST00000254810 IKZF3Q9UKT9 509 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 IPPQ9Y573 584 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 SYNCRIPO60506 623 aaKnown RBP13.37□□□□□ -0.27
H3F3B-201ENST00000254810 ZNF189O75820 626 aaPredicted RBP13.37□□□□□ -0.27
H3F3B-201ENST00000254810 BAIAP3O94812 1187 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 CD1DP15813 335 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 ZNF12P17014 697 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 KCNC4Q03721 635 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 PFKFB4Q16877 469 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 GEN1Q17RS7 908 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 KANK2Q63ZY3 851 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 ANKRD34AQ69YU3 496 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 SCIMPQ6UWF3 145 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 KIAA0408Q6ZU52 694 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 ANKRD13AQ8IZ07 590 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 C3orf58Q8NDZ4 430 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 PTCD2Q8WV60 388 aaKnown RBP13.37□□□□□ -0.27
H3F3B-201ENST00000254810 MRGBPQ9NV56 204 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 NUDT5Q9UKK9 219 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 PAIP2BQ9ULR5 123 aaKnown RBP13.37□□□□□ -0.27
H3F3B-201ENST00000254810 TIMM22Q9Y584 194 aa13.37□□□□□ -0.27
H3F3B-201ENST00000254810 AZIN1O14977 448 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 ALDH2P05091 517 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 MMP3P08254 477 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 SMPD1P17405 629 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 CCNA2P20248 432 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 PRDX3P30048 256 aaKnown RBP13.36□□□□□ -0.27
H3F3B-201ENST00000254810 GRSF1Q12849 480 aaKnown RBP eCLIP13.36□□□□□ -0.271e-10■■■■□ 20.8
H3F3B-201ENST00000254810 PDCD4Q53EL6 469 aaKnown RBP13.36□□□□□ -0.27
H3F3B-201ENST00000254810 CCNYL2Q5T2Q4 361 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 EGFLAMQ63HQ2 1017 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 C14orf80Q86SX3 495 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 ZNF354CQ86Y25 554 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 CCDC117Q8IWD4 279 aaPredicted RBP13.36□□□□□ -0.27
H3F3B-201ENST00000254810 RNF168Q8IYW5 571 aaPredicted RBP13.36□□□□□ -0.27
H3F3B-201ENST00000254810 PDPRQ8NCN5 879 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 OR6P1Q8NGX9 317 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 RSPH1Q8WYR4 309 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 BIRC7Q96CA5 298 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 SENP8Q96LD8 212 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 GLT1D1Q96MS3 346 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 TRMOQ9BU70 441 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 ZNF639Q9UID6 485 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 GPR45Q9Y5Y3 372 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 CSADQ9Y600 493 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 C1orf232A0A0U1RR37 186 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 TRIM43BA6NCK2 446 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 ASB14A6NK59 587 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 UPK1AO00322 258 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 PAGE1O75459 146 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 RSL1D1O76021 490 aaKnown RBP13.36□□□□□ -0.27
H3F3B-201ENST00000254810 SEC14L2O76054 403 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 GPIP06744 558 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 PRSS56P0CW18 603 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 IL7RP16871 459 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 MAP4P27816 1152 aaKnown RBP13.36□□□□□ -0.27
H3F3B-201ENST00000254810 CASP2P42575 452 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 OR4D2P58180 307 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 ITGADQ13349 1161 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 AQP6Q13520 282 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 NFYCQ13952 458 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 SEMA3AQ14563 771 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 PRMT9Q6P2P2 845 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 IGFN1Q86VF2 1251 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 SNX29P2Q8IUI4 249 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 DCP1BQ8IZD4 617 aaKnown RBP13.36□□□□□ -0.27
H3F3B-201ENST00000254810 SCAMP5Q8TAC9 235 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 DNAJB3Q8WWF6 145 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 KLHL5Q96PQ7 755 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 KCTD14Q9BQ13 255 aaPredicted RBP13.36□□□□□ -0.27
H3F3B-201ENST00000254810 HACD3Q9P035 362 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 ANAPC2Q9UJX6 822 aa13.36□□□□□ -0.27
H3F3B-201ENST00000254810 PEX11BO96011 259 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 F9P00740 461 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 EEF1B2P24534 225 aaKnown RBP13.35□□□□□ -0.27
H3F3B-201ENST00000254810 UFM1P61960 85 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 BTG3Q14201 252 aaPredicted RBP13.35□□□□□ -0.27
H3F3B-201ENST00000254810 ZNF773Q6PK81 442 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 PIWIL3Q7Z3Z3 882 aaKnown RBP13.35□□□□□ -0.27
H3F3B-201ENST00000254810 PAPD5Q8NDF8 572 aaKnown RBP13.35□□□□□ -0.27
H3F3B-201ENST00000254810 SLC22A17Q8WUG5 538 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 CHID1Q9BWS9 393 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 SLC27A5Q9Y2P5 690 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 PCDHGA11Q9Y5H2 935 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 DGKBQ9Y6T7 804 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 MIA3Q5JRA6 1907 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 MATN4O95460 622 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 SNAI1O95863 264 aaPredicted RBP13.35□□□□□ -0.27
H3F3B-201ENST00000254810 HTR1AP08908 422 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 MBL2P11226 248 aaPredicted RBP13.35□□□□□ -0.27
H3F3B-201ENST00000254810 IL12AP29459 219 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 IDUAP35475 653 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 HALP42357 657 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 NFKB2Q00653 900 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 SPCS2Q15005 226 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 GTF2IRD2BQ6EKJ0 949 aa13.35□□□□□ -0.27
H3F3B-201ENST00000254810 GRAMD4Q6IC98 578 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms