RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 TLR1Q15399 786 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 C10orf120Q5SQS8 335 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 OGFRL1Q5TC84 451 aaPredicted RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 C1orf74Q96LT6 269 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 RPRD1AQ96P16 312 aaPredicted RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 NR1H4Q96RI1 486 aaPredicted RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 SLC25A23Q9BV35 468 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 CINPQ9BW66 212 aaPredicted RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 ZBTB26Q9HCK0 441 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 FBRSL1Q9HCM7 1045 aaKnown RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 GIMAP2Q9UG22 337 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 TRMT6Q9UJA5 497 aaKnown RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 RAP2CQ9Y3L5 183 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 PKP3Q9Y446 797 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 PCDHB5Q9Y5E4 795 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 NUP210Q8TEM1 1887 aaPredicted RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 C7orf72A4D263 438 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 UBDO15205 165 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 E2F6O75461 281 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 HIST1H2AGP0C0S8 130 aaPredicted RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 HIST1H2ADP20671 130 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 SH3BP2P78314 561 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 OR4D1Q15615 310 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 PCSK7Q16549 785 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 LARP4Q71RC2 724 aaKnown RBP eCLIP9.17□□□□□ -0.94
RPA1-201ENST00000254719 DEFB107AQ8IZN7 70 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 FBXO32Q969P5 355 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 PSMG2Q969U7 264 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 HSPBAP1Q96EW2 488 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 HIST1H2AHQ96KK5 128 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 BIRC8Q96P09 236 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 CASD1Q96PB1 797 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 HIST1H2AJQ99878 128 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 SH3GL1Q99961 368 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 H2AFJQ9BTM1 129 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 TRMOQ9BU70 441 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 MRPL46Q9H2W6 279 aaKnown RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 GPBP1L1Q9HC44 474 aaPredicted RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 TLR8Q9NR97 1041 aaKnown RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 MBD1Q9UIS9 605 aaPredicted RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 SPO11Q9Y5K1 396 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 CELSR3Q9NYQ7 3312 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 SUPT3HB4E1H0 165 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 ZNF821O75541 412 aaPredicted RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 SUPT7LO94864 414 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 SERPINF2P08697 491 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 ZNF26P17031 533 aaPredicted RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 PSMA4P25789 261 aaKnown RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 PRDX6P30041 224 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 OR1G1P47890 313 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 MAPK10P53779 464 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 ZNF177Q13360 481 aaPredicted RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 PDCD2Q16342 344 aaPredicted RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 TCHHL1Q5QJ38 904 aaPredicted RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 CILP2Q8IUL8 1156 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 MDGA1Q8NFP4 955 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 PDCD6IPQ8WUM4 868 aaKnown RBP9.17□□□□□ -0.94
RPA1-201ENST00000254719 NCSTNQ92542 709 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 HIC2Q96JB3 615 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 RHOJQ9H4E5 214 aa9.17□□□□□ -0.94
RPA1-201ENST00000254719 CFAP99D6REC4 459 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 HDAC3O15379 428 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 AKAP10O43572 662 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 ALDH1A1P00352 501 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 ATP5F1P24539 256 aaPredicted RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 THPOP40225 353 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 SIRPB2Q5JXA9 342 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 RTP2Q5QGT7 225 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 PTAR1Q7Z6K3 402 aaPredicted RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 RTL3Q8N8U3 475 aaKnown RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 KLHL23Q8NBE8 558 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 GPATCH1Q9BRR8 931 aaKnown RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 ADGRE3Q9BY15 652 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 MRM3Q9HC36 420 aaKnown RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 CHCHD3Q9NX63 227 aaKnown RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 ABI2Q9NYB9 513 aaPredicted RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 XPR1Q9UBH6 696 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 VPS28Q9UK41 221 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 VAPBO95292 243 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 COX4I1P13073 169 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 PRDX3P30048 256 aaKnown RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 NAGLUP54802 743 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 DSC2Q02487 901 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 MGAT5BQ3V5L5 792 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 SAMD4BQ5PRF9 694 aaKnown RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 FBXL22Q6P050 247 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 RP9Q8TA86 221 aaKnown RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 NAT14Q8WUY8 206 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 NCLNQ969V3 563 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 RPL10LQ96L21 214 aaKnown RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 ZNF512Q96ME7 567 aaPredicted RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 NSUN5Q96P11 429 aaKnown RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 ADAM2Q99965 735 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 SCML2Q9UQR0 700 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 KIF26AQ9ULI4 1882 aaPredicted RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.16□□□□□ -0.94
RPA1-201ENST00000254719 PLOD2O00469 737 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 ELNP15502 786 aa9.16□□□□□ -0.94
RPA1-201ENST00000254719 TBX4P57082 545 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms