RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 SH3BP2P78314 561 aa18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 MS4A2Q01362 244 aa18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 LAMB3Q13751 1172 aa18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 ADGRF1Q5T601 910 aa18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 PSRC1Q6PGN9 363 aaPredicted RBP18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 KLHDC10Q6PID8 442 aa18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 ADGRG6Q86SQ4 1221 aa18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 PGAM4Q8N0Y7 254 aa18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 LPGAT1Q92604 370 aa18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 FAR2Q96K12 515 aa18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 CEP295NLQ96MC4 621 aa18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 EFCAB1Q9HAE3 211 aa18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 HSFX1Q9UBD0 423 aa18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 SLC4A7Q9Y6M7 1214 aa18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 MYO7AQ13402 2215 aa18.64■□□□□ 0.57
PDLIM4-201ENST00000253754 A0A1B0GVM2 712 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 LCHNA4D1U4 455 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 UBDO15205 165 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 GPR39O43194 453 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 RHOBTB1O94844 696 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 TCN1P20061 433 aaPredicted RBP18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 FOXA1P55317 472 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 IRGCQ6NXR0 463 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 TMEM154Q6P9G4 183 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 HERC6Q8IVU3 1022 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 PIANPQ8IYJ0 282 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 OR9I1Q8NGQ6 314 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 CLP1Q92989 425 aaKnown RBP18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 SLC22A12Q96S37 553 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 SLC30A3Q99726 388 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 CCDC167Q9P0B6 97 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 GIMAP2Q9UG22 337 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 FKBPLQ9UIM3 349 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 A0A1B0GTL3 188 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 DPPA5A6NC42 116 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 TLL1O43897 1013 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 OR1I1O60431 355 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 C1RP00736 705 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 MZF1P28698 734 aaPredicted RBP18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 NFKB2Q00653 900 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 TWF1Q12792 350 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 TAF1AQ15573 450 aaPredicted RBP18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 SFT2D3Q587I9 215 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 PSAPL1Q6NUJ1 521 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 AFAP1L2Q8N4X5 818 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 PCDH20Q8N6Y1 951 aaKnown RBP18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 GDPD5Q8WTR4 605 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 OVCA2Q8WZ82 227 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 KCNA7Q96RP8 456 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 ATOH8Q96SQ7 321 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 SERPINI1Q99574 410 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 RAD9AQ99638 391 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 KLF16Q9BXK1 252 aaPredicted RBP18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 ZBP1Q9H171 429 aa18.63■□□□□ 0.57
PDLIM4-201ENST00000253754 A6NHS1 94 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 SRP72O76094 671 aaKnown RBP18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 TMCC1O94876 653 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 CNPP09543 421 aaKnown RBP18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 MRPS22P82650 360 aaKnown RBP18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 GALNT1Q10472 559 aaPredicted RBP18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 TRAF2Q12933 501 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 FLOT2Q14254 428 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 FASTKQ14296 549 aaKnown RBP18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 TRIP10Q15642 601 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 AGKQ53H12 422 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 AFTPHQ6ULP2 937 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 CARNMT1Q8N4J0 409 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 RIMKLBQ9ULI2 386 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 TBC1D30Q9Y2I9 924 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 PSMD12O00232 456 aaPredicted RBP18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 FBP2O00757 339 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 LILRB3O75022 631 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 CDK14O94921 469 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 CTSAP10619 480 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 INHBCP55103 352 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 MRPS35P82673 323 aaKnown RBP18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 UGT3A2Q3SY77 523 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 C19orf60Q96EN9 201 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 GPR21Q99679 349 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 EBF3Q9H4W6 596 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 INTS10Q9NVR2 710 aaKnown RBP18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 CORO1CQ9ULV4 474 aaPredicted RBP18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 DNAJC15Q9Y5T4 150 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 PLXNA4Q9HCM2 1894 aa18.62■□□□□ 0.57
PDLIM4-201ENST00000253754 REV3LO60673 3130 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 C2orf81A6NN90 581 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 CDC7O00311 574 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 NDUFS3O75489 264 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 UBTFL6P0CB48 400 aaPredicted RBP18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 GFAPP14136 432 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 ZXDBP98169 803 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 SQLEQ14534 574 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 RFTN1Q14699 578 aaPredicted RBP18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 VEPH1Q14D04 833 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 TSNQ15631 228 aaKnown RBP18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 CHST9Q7L1S5 443 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 TMEM150AQ86TG1 271 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 TCEAL8Q8IYN2 117 aa18.61■□□□□ 0.57
PDLIM4-201ENST00000253754 MYRFLQ96LU7 910 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms