RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 RP1P56715 2156 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 MYLKQ15746 1914 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 LOC285095A0A1B0GVY8 99 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 RGSL1A5PLK6 1076 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 FADS2P1A8MWK0 482 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 MIF4GDA9UHW6 222 aaKnown RBP22.83■■□□□ 1.25
LSM4-201ENST00000252816 INPP4BO15327 924 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 TJP3O95049 919 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 PYGLP06737 847 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 CETN2P41208 172 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 GNPDA1P46926 289 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 EIF3EP60228 445 aaKnown RBP22.83■■□□□ 1.25
LSM4-201ENST00000252816 TMC3Q7Z5M5 1100 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 NRROSQ86YC3 692 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 RNF10Q8N5U6 811 aaKnown RBP22.83■■□□□ 1.25
LSM4-201ENST00000252816 UBL4BQ8N7F7 174 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 FAM46DQ8NEK8 389 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 GPBAR1Q8TDU6 330 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 SCARF2Q96GP6 870 aaPredicted RBP22.83■■□□□ 1.25
LSM4-201ENST00000252816 MRGPRX2Q96LB1 330 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 CCDC86Q9H6F5 360 aaKnown RBP22.83■■□□□ 1.25
LSM4-201ENST00000252816 ST14Q9Y5Y6 855 aa22.83■■□□□ 1.25
LSM4-201ENST00000252816 AURKAO14965 403 aa22.82■■□□□ 1.24
LSM4-201ENST00000252816 ARHGAP6O43182 974 aa22.82■■□□□ 1.24
LSM4-201ENST00000252816 SLC4A1P02730 911 aa22.82■■□□□ 1.24
LSM4-201ENST00000252816 IVLP07476 585 aa22.82■■□□□ 1.24
LSM4-201ENST00000252816 RBP3P10745 1247 aa22.82■■□□□ 1.24
LSM4-201ENST00000252816 CCDC70Q6NSX1 233 aa22.82■■□□□ 1.24
LSM4-201ENST00000252816 OGFOD3Q6PK18 319 aa22.82■■□□□ 1.24
LSM4-201ENST00000252816 GPR156Q8NFN8 814 aa22.82■■□□□ 1.24
LSM4-201ENST00000252816 NAT6Q93015 286 aa22.82■■□□□ 1.24
LSM4-201ENST00000252816 HES6Q96HZ4 224 aa22.82■■□□□ 1.24
LSM4-201ENST00000252816 GORASP1Q9BQQ3 440 aa22.82■■□□□ 1.24
LSM4-201ENST00000252816 ABCG4Q9H172 646 aa22.82■■□□□ 1.24
LSM4-201ENST00000252816 TRNAU1APQ9NX07 287 aaKnown RBP22.82■■□□□ 1.24
LSM4-201ENST00000252816 RSPH14Q9UHP6 348 aa22.82■■□□□ 1.24
LSM4-201ENST00000252816 OAS3Q9Y6K5 1087 aaKnown RBP22.82■■□□□ 1.24
LSM4-201ENST00000252816 APC2O95996 2303 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 NOBOXO60393 691 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 EPOP01588 193 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 AK4P27144 223 aaPredicted RBP22.81■■□□□ 1.24
LSM4-201ENST00000252816 CHRNA4P43681 627 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 CYP4F3Q08477 520 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 SIRPB2Q5JXA9 342 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 PROSER1Q86XN7 944 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 CDKL3Q8IVW4 592 aaPredicted RBP22.81■■□□□ 1.24
LSM4-201ENST00000252816 SLC25A41Q8N5S1 370 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 GPR26Q8NDV2 337 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 IPMKQ8NFU5 416 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 CCDC3Q9BQI4 270 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 GPR63Q9BZJ6 419 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 GBA3Q9H227 469 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 RABGEF1Q9UJ41 708 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 GUCA1BQ9UMX6 200 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 PLEKHM1Q9Y4G2 1056 aa22.81■■□□□ 1.24
LSM4-201ENST00000252816 ADCY8P40145 1251 aa22.8■■□□□ 1.24
LSM4-201ENST00000252816 ALS2CLQ60I27 953 aa22.8■■□□□ 1.24
LSM4-201ENST00000252816 DARS2Q6PI48 645 aaKnown RBP22.8■■□□□ 1.24
LSM4-201ENST00000252816 MARK2Q7KZI7 788 aaKnown RBP22.8■■□□□ 1.24
LSM4-201ENST00000252816 CCDC112Q8NEF3 446 aa22.8■■□□□ 1.24
LSM4-201ENST00000252816 TSGA10Q9BZW7 698 aa22.8■■□□□ 1.24
LSM4-201ENST00000252816 SPATS2LQ9NUQ6 558 aaKnown RBP22.8■■□□□ 1.24
LSM4-201ENST00000252816 PCDHB1Q9Y5F3 818 aa22.8■■□□□ 1.24
LSM4-201ENST00000252816 PCYT1BQ9Y5K3 369 aaPredicted RBP22.8■■□□□ 1.24
LSM4-201ENST00000252816 ANKRD11Q6UB99 2663 aaPredicted RBP22.8■■□□□ 1.24
LSM4-201ENST00000252816 TCRBV7S2A1N4TA0A589 114 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 SRRM3A6NNA2 597 aaPredicted RBP22.79■■□□□ 1.24
LSM4-201ENST00000252816 B4DGG1 531 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 KCNN4O15554 427 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 ATP1A1P05023 1023 aaKnown RBP22.79■■□□□ 1.24
LSM4-201ENST00000252816 CTBSQ01459 385 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 ILF3Q12906 894 aaKnown RBP eCLIP22.79■■□□□ 1.24
LSM4-201ENST00000252816 KLF1Q13351 362 aaPredicted RBP22.79■■□□□ 1.24
LSM4-201ENST00000252816 MPP3Q13368 585 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 SLC1A5Q15758 541 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 PYCR3Q53H96 274 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 ANKRD20A2Q5SQ80 823 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 ANKRD20A1Q5TYW2 823 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 ANKRD20A3Q5VUR7 823 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 CCDC74AQ96AQ1 378 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 GSDMCQ9BYG8 508 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 DPEP2Q9H4A9 486 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 TAAR2Q9P1P5 351 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 NFKBIL1Q9UBC1 381 aaPredicted RBP22.79■■□□□ 1.24
LSM4-201ENST00000252816 DKK4Q9UBT3 224 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 R3HDM2Q9Y2K5 976 aaKnown RBP22.79■■□□□ 1.24
LSM4-201ENST00000252816 GPSM3Q9Y4H4 160 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 CELSR3Q9NYQ7 3312 aa22.79■■□□□ 1.24
LSM4-201ENST00000252816 COL27A1Q8IZC6 1860 aaPredicted RBP22.79■■□□□ 1.24
LSM4-201ENST00000252816 ARHGEF17Q96PE2 2063 aaPredicted RBP22.78■■□□□ 1.24
LSM4-201ENST00000252816 KRT86O43790 486 aa22.78■■□□□ 1.24
LSM4-201ENST00000252816 CSO75390 466 aaKnown RBP22.78■■□□□ 1.24
LSM4-201ENST00000252816 KRT37O76014 449 aa22.78■■□□□ 1.24
LSM4-201ENST00000252816 ASMTLO95671 621 aa22.78■■□□□ 1.24
LSM4-201ENST00000252816 BPIP17213 487 aa22.78■■□□□ 1.24
LSM4-201ENST00000252816 DCDC1P59894 354 aa22.78■■□□□ 1.24
LSM4-201ENST00000252816 SLC30A9Q6PML9 568 aa22.78■■□□□ 1.24
LSM4-201ENST00000252816 LRRC8AQ8IWT6 810 aa22.78■■□□□ 1.24
LSM4-201ENST00000252816 TTC30BQ8N4P2 665 aa22.78■■□□□ 1.24
LSM4-201ENST00000252816 CCDC110Q8TBZ0 833 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms