RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 ZRANB3Q5FWF4 1079 aa25.07■■□□□ 1.6
TMEM55B-201ENST00000250489 KBTBD2Q8IY47 623 aa25.07■■□□□ 1.6
TMEM55B-201ENST00000250489 CLYBLQ8N0X4 340 aa25.07■■□□□ 1.6
TMEM55B-201ENST00000250489 HMGCLL1Q8TB92 370 aa25.07■■□□□ 1.6
TMEM55B-201ENST00000250489 BATF3Q9NR55 127 aa25.07■■□□□ 1.6
TMEM55B-201ENST00000250489 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.07■■□□□ 1.6
TMEM55B-201ENST00000250489 GALPQ9UBC7 116 aa25.07■■□□□ 1.6
TMEM55B-201ENST00000250489 PCDHB9Q9Y5E1 797 aa25.07■■□□□ 1.6
TMEM55B-201ENST00000250489 A0A0U1RQS6 177 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 PFDN6O15212 129 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 LILRB3O75022 631 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 CDK14O94921 469 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 MT-CO1P00395 513 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 PYGLP06737 847 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 GFAPP14136 432 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 CYP4F8P98187 520 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 CTSL3PQ5NE16 218 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 GK5Q6ZS86 529 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 BHMTQ93088 406 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 CDRT15Q96T59 188 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 WDR41Q9HAD4 459 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 PACSIN3Q9UKS6 424 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 RNF112Q9ULX5 631 aa25.06■■□□□ 1.6
TMEM55B-201ENST00000250489 OR1I1O60431 355 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 VPS26AO75436 327 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 ENO3P13929 434 aaPredicted RBP25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 GABRR2P28476 465 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 ART3Q13508 389 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 EML3Q32P44 896 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 MFN1Q8IWA4 741 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 NKAPQ8N5F7 415 aaKnown RBP25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 SLC30A3Q99726 388 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 FNDC3AQ9Y2H6 1198 aaKnown RBP25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 ZNF711Q9Y462 761 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 SUPT3HB4E1H0 165 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 K7ERQ8 282 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 SUPT3HO75486 399 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 FGF4P08620 206 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 CD9P21926 228 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 AP1S1P61966 158 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 PTK2BQ14289 1009 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 TSNQ15631 228 aaKnown RBP25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 PIGGQ5H8A4 983 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 RNF111Q6ZNA4 994 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 LARP4Q71RC2 724 aaKnown RBP eCLIP25.05■■□□□ 1.61e-12■■■□□ 17.2
TMEM55B-201ENST00000250489 GAREM2Q75VX8 874 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 APCDD1Q8J025 514 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 C19orf60Q96EN9 201 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 NPAS2Q99743 824 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 MID1IP1Q9NPA3 183 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 IL17CQ9P0M4 197 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 LSM7Q9UK45 103 aaKnown RBP25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 ASB3Q9Y575 518 aa25.05■■□□□ 1.6
TMEM55B-201ENST00000250489 CARNS1A5YM72 827 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 CDC7O00311 574 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 PPP6CO00743 305 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 NIPSNAP2O75323 286 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 GPC4O75487 556 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 ECI2O75521 394 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 CLCN4P51793 760 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 XIAPP98170 497 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 ZNF423Q2M1K9 1284 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 AARS2Q5JTZ9 985 aaKnown RBP25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 DHDDSQ86SQ9 333 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 FBXO39Q8N4B4 442 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 HIPK4Q8NE63 616 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 TTC16Q8NEE8 873 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 MYO19Q96H55 970 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 NSUN5Q96P11 429 aaKnown RBP25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 ZNF184Q99676 751 aaPredicted RBP25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 LRCH1Q9Y2L9 728 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 KIAA1671Q9BY89 1806 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 CLASP2O75122 1294 aaKnown RBP25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 PRAMEF12O95522 483 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 CSF2RAP15509 400 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 ITGB8P26012 769 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 DPP6P42658 865 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 THOP1P52888 689 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 FASTKQ14296 549 aaKnown RBP25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 MAPRE2Q15555 327 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 ARMC12Q5T9G4 340 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 KBTBD6Q86V97 674 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 GPR65Q8IYL9 337 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 SIDT2Q8NBJ9 832 aaKnown RBP25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 MRPS31Q92665 395 aaKnown RBP25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 C3orf30Q96M34 536 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 C2orf49Q9BVC5 232 aaPredicted RBP25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 TM6SF2Q9BZW4 377 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 MAGEE1Q9HCI5 957 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 TRMT6Q9UJA5 497 aaKnown RBP25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 DNAJC15Q9Y5T4 150 aa25.04■■□□□ 1.6
TMEM55B-201ENST00000250489 NPEPPSL1A6NEC2 478 aa25.03■■□□□ 1.6
TMEM55B-201ENST00000250489 PSMD12O00232 456 aaPredicted RBP25.03■■□□□ 1.6
TMEM55B-201ENST00000250489 CFLARO15519 480 aa25.03■■□□□ 1.6
TMEM55B-201ENST00000250489 PGLSO95336 258 aa25.03■■□□□ 1.6
TMEM55B-201ENST00000250489 TSPAN12O95859 305 aa25.03■■□□□ 1.6
TMEM55B-201ENST00000250489 CTPS1P17812 591 aa25.03■■□□□ 1.6
TMEM55B-201ENST00000250489 EEF1DP29692 281 aaKnown RBP25.03■■□□□ 1.6
TMEM55B-201ENST00000250489 PPM1AP35813 382 aa25.03■■□□□ 1.6
TMEM55B-201ENST00000250489 ANO7Q6IWH7 933 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms