RNA–Protein interactions for RNA: ENST00000249504.6

HOXD11-201, Transcript of homeobox D11, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXD11, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-201ENST00000249504 RAVER1Q8IY67 606 aaKnown RBP19.41■□□□□ 0.7
HOXD11-201ENST00000249504 DENND6BQ8NEG7 585 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 STYXQ8WUJ0 223 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 TRIM56Q9BRZ2 755 aaKnown RBP19.41■□□□□ 0.7
HOXD11-201ENST00000249504 NLE1Q9NVX2 485 aaPredicted RBP19.41■□□□□ 0.7
HOXD11-201ENST00000249504 ZC3H7BQ9UGR2 993 aaKnown RBP19.41■□□□□ 0.7
HOXD11-201ENST00000249504 STX7O15400 261 aaKnown RBP19.41■□□□□ 0.7
HOXD11-201ENST00000249504 RECQL5O94762 991 aaPredicted RBP19.41■□□□□ 0.7
HOXD11-201ENST00000249504 USP1O94782 785 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 GM2AP17900 193 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 PMS2P54278 862 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 ACVR1Q04771 509 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 PTPRCAPQ14761 206 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 STAT4Q14765 748 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 TEAD4Q15561 434 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 SKIDA1Q1XH10 827 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 ANKRD20A4Q4UJ75 823 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 OR4K2Q8NGD2 314 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 OR13C4Q8NGS5 318 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 OR13J1Q8NGT2 312 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 MFSD3Q96ES6 412 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 C9orf72Q96LT7 481 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 COQ10AQ96MF6 247 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 RUFY1Q96T51 708 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 PLAC1Q9HBJ0 212 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 FAM53CQ9NYF3 392 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 SLC2A6Q9UGQ3 507 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 PKP3Q9Y446 797 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 SLCO1B1Q9Y6L6 691 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 RPS6KL1Q9Y6S9 549 aa19.41■□□□□ 0.7
HOXD11-201ENST00000249504 MYO15AQ9UKN7 3530 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 CCDC78A2IDD5 438 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 GOLGA8CPA6NN73 597 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 LRP3O75074 770 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 TTC4O95801 387 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 POLBP06746 335 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 HSD17B3P37058 310 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 AFF3P51826 1226 aaKnown RBP19.4■□□□□ 0.7
HOXD11-201ENST00000249504 SPEM2Q0P670 501 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 TRIM61Q5EBN2 209 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 STEAP4Q687X5 459 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 ESRP1Q6NXG1 681 aaKnown RBP19.4■□□□□ 0.7
HOXD11-201ENST00000249504 CES3Q6UWW8 571 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 UNC5AQ6ZN44 842 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 TRMT10CQ7L0Y3 403 aaKnown RBP19.4■□□□□ 0.7
HOXD11-201ENST00000249504 TECPR1Q7Z6L1 1165 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 C1orf216Q8TAB5 229 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 UBLCP1Q8WVY7 318 aaPredicted RBP19.4■□□□□ 0.7
HOXD11-201ENST00000249504 ZNF669Q96BR6 464 aaPredicted RBP19.4■□□□□ 0.7
HOXD11-201ENST00000249504 DNAJC1Q96KC8 554 aaKnown RBP19.4■□□□□ 0.7
HOXD11-201ENST00000249504 FCRL3Q96P31 734 aaPredicted RBP19.4■□□□□ 0.7
HOXD11-201ENST00000249504 LENG8Q96PV6 779 aaPredicted RBP19.4■□□□□ 0.7
HOXD11-201ENST00000249504 CDC42EP4Q9H3Q1 356 aaKnown RBP19.4■□□□□ 0.7
HOXD11-201ENST00000249504 SMOC1Q9H4F8 434 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 BPIFA1Q9NP55 256 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 NINJ2Q9NZG7 142 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 PKD2L2Q9NZM6 624 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 CA5BQ9Y2D0 317 aa19.4■□□□□ 0.7
HOXD11-201ENST00000249504 CACNA1EQ15878 2313 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 ZCWPW2A0A1B0GU75 182 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 RGSL1A5PLK6 1076 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 FPGTO14772 594 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 GFRA3O60609 400 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 CD38P28907 300 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 HADHAP40939 763 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 SPINT3P49223 89 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 CRYMQ14894 314 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 LRRC14Q15048 493 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 SPANXN3Q5MJ09 141 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 PLA2G2CQ5R387 149 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 PALM2Q8IXS6 379 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 TMEM145Q8NBT3 493 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 SKA1Q96BD8 255 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 NUS1Q96E22 293 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 CFAP36Q96G28 342 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 NUSAP1Q9BXS6 441 aaKnown RBP19.39■□□□□ 0.69
HOXD11-201ENST00000249504 KCTD5Q9NXV2 234 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 FAM169AQ9Y6X4 670 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 PLXNB3Q9ULL4 1909 aa19.39■□□□□ 0.69
HOXD11-201ENST00000249504 TP53BP1Q12888 1972 aaPredicted RBP19.38■□□□□ 0.69
HOXD11-201ENST00000249504 PATE3B3GLJ2 98 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 WNT9AO14904 365 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 KHNYNO15037 678 aaKnown RBP19.38■□□□□ 0.69
HOXD11-201ENST00000249504 RAD51BO15315 384 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 BPIP17213 487 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 ETV3P41162 512 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 CSNK1EP49674 416 aaKnown RBP19.38■□□□□ 0.69
HOXD11-201ENST00000249504 TMPRSS15P98073 1019 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 AGERQ15109 404 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 KYNUQ16719 465 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 KIAA0930Q6ICG6 404 aaPredicted RBP19.38■□□□□ 0.69
HOXD11-201ENST00000249504 LRIG3Q6UXM1 1119 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 RFLNAQ6ZTI6 216 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 Q6ZVL8 140 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 DCLK2Q8N568 766 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 DTD2Q96FN9 168 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 CDKN2AIPNLQ96HQ2 116 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 PKNOX2Q96KN3 472 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 TTC25Q96NG3 672 aa19.38■□□□□ 0.69
HOXD11-201ENST00000249504 KLF6Q99612 283 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms