RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 IARS2Q9NSE4 1012 aaKnown RBP12.89□□□□□ -0.35
LSM8-201ENST00000249299 FAM53CQ9NYF3 392 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 GGT7Q9UJ14 662 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 COMMD10Q9Y6G5 202 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 MIA3Q5JRA6 1907 aa12.89□□□□□ -0.35
LSM8-201ENST00000249299 TLDC2A0PJX2 215 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 ANTXRLA6NF34 631 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 NEMP1O14524 444 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 SPINT1O43278 529 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 PLRG1O43660 514 aaKnown RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 SYF2O95926 243 aaKnown RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 C1SP09871 688 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 CD9P21926 228 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 TEAD1P28347 426 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 PMLP29590 882 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 OXTRP30559 389 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 MC4RP32245 332 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 PTGER3P43115 390 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 CD151P48509 253 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 LIG3P49916 1009 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 LIMK2P53671 638 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 NFATC2Q13469 925 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 PEX6Q13608 980 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 ITIH4Q14624 930 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 PTAR1Q7Z6K3 402 aaPredicted RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 STRA8Q7Z7C7 330 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 UNC5BQ8IZJ1 945 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 TRAM1L1Q8N609 369 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 ZNF398Q8TD17 642 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 ACMSDQ8TDX5 336 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 CXorf40AQ8TE69 158 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 EDAQ92838 391 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 ISL2Q96A47 359 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 ALKBH8Q96BT7 664 aaKnown RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 DTD2Q96FN9 168 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 ATP6V1G3Q96LB4 118 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 SGK2Q9HBY8 427 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 ITM2CQ9NQX7 267 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 USP36Q9P275 1121 aaKnown RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 MUTYHQ9UIF7 546 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 FKBPLQ9UIM3 349 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 SIT1Q9Y3P8 196 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 A0A1W2PP55 124 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 F8W8V4 182 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 GAPDHSO14556 408 aaPredicted RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 BUD23O43709 281 aaKnown RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 ZNF217O75362 1048 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 RNASEH2AO75792 299 aaKnown RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 PRAMEF1O95521 474 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 S1PR4O95977 384 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 AHSGP02765 367 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 GABRG2P18507 467 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 NDUFV2P19404 249 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 HOXA6P31267 233 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 NUDT1P36639 197 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 SLC1A2P43004 574 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 CLCN5P51795 746 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 METAP1P53582 386 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 TAS2R38P59533 333 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 RPS21P63220 83 aaKnown RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 ZNF284Q2VY69 593 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 HENMT1Q5T8I9 393 aaKnown RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 LCA5Q86VQ0 697 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 ZC3HC1Q86WB0 502 aaKnown RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 GPR26Q8NDV2 337 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 TLCD1Q96CP7 247 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 VPS35Q96QK1 796 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 SMIM14Q96QK8 99 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 AGAP2Q99490 1192 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 C1QTNF7Q9BXJ2 289 aa12.88□□□□□ -0.35
LSM8-201ENST00000249299 FAM126AQ9BYI3 521 aaPredicted RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 SUDS3Q9H7L9 328 aaPredicted RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 SSU72Q9NP77 194 aaKnown RBP12.88□□□□□ -0.35
LSM8-201ENST00000249299 TCRBV21S2A2A0A5A6 115 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 CCDC78A2IDD5 438 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 GOLGA8CPA6NN73 597 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 C10orf142B7Z368 130 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 H3BMM5 538 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 NDUFS3O75489 264 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 TM7SF2O76062 418 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 ITGA2BP08514 1039 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 C6P13671 934 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 ZNF7P17097 686 aaPredicted RBP12.87□□□□□ -0.35
LSM8-201ENST00000249299 RPS3P23396 243 aaKnown RBP eCLIP12.87□□□□□ -0.35
LSM8-201ENST00000249299 SLCO1A2P46721 670 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 SLC18A1P54219 525 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 TMPRSS15P98073 1019 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 POU4F1Q01851 419 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 EFTUD2Q15029 972 aaKnown RBP eCLIP12.87□□□□□ -0.353e-10■■■■■ 27.3
LSM8-201ENST00000249299 PTPRRQ15256 657 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 POM121L1PQ3SYA9 428 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 Q6ZS52 159 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 TRIM67Q6ZTA4 783 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 Q6ZVL8 140 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 HSD11B1LQ7Z5J1 315 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 TRABD2AQ86V40 505 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 RBFAQ8N0V3 343 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 TSTD1Q8NFU3 115 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 GANCQ8TET4 914 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms