RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CARS2Q9HA77 564 aaKnown RBP24.21■■□□□ 1.47
SDF2L1-201ENST00000248958 TRNAU1APQ9NX07 287 aaKnown RBP24.21■■□□□ 1.47
SDF2L1-201ENST00000248958 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.21■■□□□ 1.47
SDF2L1-201ENST00000248958 MSRB2Q9Y3D2 182 aa24.21■■□□□ 1.47
SDF2L1-201ENST00000248958 SCN8AQ9UQD0 1980 aa24.21■■□□□ 1.47
SDF2L1-201ENST00000248958 LIASO43766 372 aa24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 PEX6Q13608 980 aa24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 NR0B2Q15466 257 aa24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 SMAD1Q15797 465 aaKnown RBP24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 CCDC157Q569K6 752 aa24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 RANBP10Q6VN20 620 aa24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 KLHDC8BQ8IXV7 354 aa24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 TRAM1L1Q8N609 369 aa24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 RTP4Q96DX8 246 aa24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 SCARF2Q96GP6 870 aaPredicted RBP24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 PLEKHG4BQ96PX9 1271 aa24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 GORASP1Q9BQQ3 440 aa24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 FICDQ9BVA6 458 aa24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 FEZ2Q9UHY8 353 aaPredicted RBP24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 ZKSCAN5Q9Y2L8 839 aa24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 JRKLQ9Y4A0 524 aa24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 SPO11Q9Y5K1 396 aa24.2■■□□□ 1.46
SDF2L1-201ENST00000248958 PSMD3O43242 534 aa24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 TOP3BO95985 862 aaKnown RBP24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 AGTP01019 485 aa24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 MSNP26038 577 aaKnown RBP24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 ADRA1AP35348 466 aa24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 CHRNA4P43681 627 aa24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 DHRS13Q6UX07 377 aa24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 GLT6D1Q7Z4J2 308 aa24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 TMPRSS12Q86WS5 348 aa24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 GPR26Q8NDV2 337 aa24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 DTX3LQ8TDB6 740 aa24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 SPATA16Q9BXB7 569 aa24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 GSDMCQ9BYG8 508 aa24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 VPS18Q9P253 973 aa24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 SUFUQ9UMX1 484 aa24.19■■□□□ 1.46
SDF2L1-201ENST00000248958 EME2A4GXA9 379 aaPredicted RBP24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 INPP4BO15327 924 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 PPFIA2O75334 1257 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 SLC4A1P02730 911 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 CELA2BP08218 269 aaPredicted RBP24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 ACTN2P35609 894 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 OASLQ15646 514 aaKnown RBP24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 ZNF569Q5MCW4 686 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 KCTD16Q68DU8 428 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 NYAP1Q6ZVC0 841 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 TAF8Q7Z7C8 310 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 REXO1L1PQ8IX06 675 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 ARL10Q8N8L6 244 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 BLOC1S5Q8TDH9 187 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 NAT6Q93015 286 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 TMEM168Q9H0V1 697 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 KCNF1Q9H3M0 494 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 RMI1Q9H9A7 625 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 KLK13Q9UKR3 277 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 CNOT6Q9ULM6 557 aaKnown RBP24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 ZNF148Q9UQR1 794 aa24.18■■□□□ 1.46
SDF2L1-201ENST00000248958 LY6G6EA0A0G2JKS1 128 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 FADS2P1A8MWK0 482 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 AURKAO14965 403 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 ASMTLO95671 621 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 BPIP17213 487 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 SPINK2P20155 84 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 GNPDA1P46926 289 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 GDF10P55107 478 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 ILF3Q12906 894 aaKnown RBP eCLIP24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 CCNG2Q16589 344 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 DRICH1Q6PGQ1 229 aaPredicted RBP24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 DOK6Q6PKX4 331 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 TTC30BQ8N4P2 665 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 OR6C4Q8NGE1 309 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 GPBAR1Q8TDU6 330 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 ATG4AQ8WYN0 398 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 TBL1YQ9BQ87 522 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 ARNT2Q9HBZ2 717 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 HOMER3Q9NSC5 361 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 GPR34Q9UPC5 381 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 PKP3Q9Y446 797 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 U3KQA8 63 aa24.17■■□□□ 1.46
SDF2L1-201ENST00000248958 CEP104O60308 925 aa24.16■■□□□ 1.46
SDF2L1-201ENST00000248958 FGGP02679 453 aa24.16■■□□□ 1.46
SDF2L1-201ENST00000248958 PDE1BQ01064 536 aa24.16■■□□□ 1.46
SDF2L1-201ENST00000248958 ALS2CLQ60I27 953 aa24.16■■□□□ 1.46
SDF2L1-201ENST00000248958 SLC35F3Q8IY50 421 aa24.16■■□□□ 1.46
SDF2L1-201ENST00000248958 CACTIN-AS1Q8N1I8 211 aa24.16■■□□□ 1.46
SDF2L1-201ENST00000248958 C1orf54Q8WWF1 131 aa24.16■■□□□ 1.46
SDF2L1-201ENST00000248958 LRRC40Q9H9A6 602 aa24.16■■□□□ 1.46
SDF2L1-201ENST00000248958 IL17CQ9P0M4 197 aa24.16■■□□□ 1.46
SDF2L1-201ENST00000248958 TMEM98Q9Y2Y6 226 aa24.16■■□□□ 1.46
SDF2L1-201ENST00000248958 C2orf81A6NN90 581 aa24.15■■□□□ 1.46
SDF2L1-201ENST00000248958 GPR89AB7ZAQ6 455 aa24.15■■□□□ 1.46
SDF2L1-201ENST00000248958 METTL18O95568 372 aa24.15■■□□□ 1.46
SDF2L1-201ENST00000248958 FUCA1P04066 466 aa24.15■■□□□ 1.46
SDF2L1-201ENST00000248958 GPR89BP0CG08 455 aa24.15■■□□□ 1.46
SDF2L1-201ENST00000248958 SPAM1P38567 509 aa24.15■■□□□ 1.46
SDF2L1-201ENST00000248958 POLD2P49005 469 aa24.15■■□□□ 1.46
SDF2L1-201ENST00000248958 LRP8Q14114 963 aa24.15■■□□□ 1.46
SDF2L1-201ENST00000248958 TAF1AQ15573 450 aaPredicted RBP24.15■■□□□ 1.46
SDF2L1-201ENST00000248958 KCTD11Q693B1 232 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms