RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 CCND3P30281 292 aaPredicted RBP21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 SCNN1BP51168 640 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 ZNF140P52738 457 aaPredicted RBP21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 TXNL4AP83876 142 aaKnown RBP21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 MTA1Q13330 715 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 GRB7Q14451 532 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 NRF1Q16656 503 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 GEN1Q17RS7 908 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 C5orf22Q49AR2 442 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 HMBOX1Q6NT76 420 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 RGMBQ6NW40 437 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 PRMT9Q6P2P2 845 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 IYDQ6PHW0 289 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 MIER2Q8N344 545 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 SPATA17Q96L03 361 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 PRPF18Q99633 342 aaKnown RBP21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 DERL2Q9GZP9 239 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 TUBB1Q9H4B7 451 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 SYTL2Q9HCH5 934 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 SNX13Q9Y5W8 968 aa21.56■■□□□ 1.04
SH2D3A-201ENST00000245908 CLASP2O75122 1294 aaKnown RBP21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 MATN4O95460 622 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 CKBP12277 381 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 GFAPP14136 432 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 HOXD9P28356 352 aaPredicted RBP21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 MBTPS1Q14703 1052 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 MAP7D1Q3KQU3 841 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 NADK2Q4G0N4 442 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 MTX3Q5HYI7 312 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 TRAF7Q6Q0C0 670 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 PCSK9Q8NBP7 692 aaKnown RBP21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 OR2T34Q8NGX1 318 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 OR2T3Q8NH03 318 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 ZUFSPQ96AP4 578 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 OSBPL11Q9BXB4 747 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 GIMAP2Q9UG22 337 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 SLC27A5Q9Y2P5 690 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 AK5Q9Y6K8 562 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 MTMR11A4FU01 709 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 F5H5T6 163 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 VILLO15195 856 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 PRSS56P0CW18 603 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 SETMARQ53H47 684 aaPredicted RBP21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 FAM171A1Q5VUB5 890 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 LGI2Q8N0V4 545 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 BBS5Q8N3I7 341 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 STAG3L4Q8TBR4 150 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 TRPC4APQ8TEL6 797 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 CYP2S1Q96SQ9 504 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 CCSER2Q9H7U1 834 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 ARMC1Q9NVT9 282 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 COMMD8Q9NX08 183 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 HSFX1Q9UBD0 423 aa21.55■■□□□ 1.04
SH2D3A-201ENST00000245908 NME4O00746 187 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 RHOBTB1O94844 696 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 SLC10A3P09131 477 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 ZDHHC11BP0C7U3 371 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 LBPP18428 481 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 CAPN3P20807 821 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 ATP6V1B2P21281 511 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 KPNA1P52294 538 aaPredicted RBP21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 ARPP19P56211 112 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 LCP2Q13094 533 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 PITRM1Q5JRX3 1037 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 RBM44Q6ZP01 1051 aaKnown RBP21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 DDIASQ8IXT1 998 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 MINDY1Q8N5J2 469 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 DDI1Q8WTU0 396 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 MPP4Q96JB8 637 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 KCNA7Q96RP8 456 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 RBM38Q9H0Z9 239 aaKnown RBP21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 MAGEH1Q9H213 219 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 CRISPLD1Q9H336 500 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 SDR39U1Q9NRG7 319 aaPredicted RBP21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 GMPR2Q9P2T1 348 aaKnown RBP21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 POLG2Q9UHN1 485 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 MED16Q9Y2X0 877 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 A0A0D9SEW6 157 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 LCHNA4D1U4 455 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 ZNF839A8K0R7 811 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 SUPT3HB4E1H0 165 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 SUPT3HO75486 399 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 EEF1DP29692 281 aaKnown RBP21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 NME5P56597 212 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 CLCQ05315 142 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 SFSWAPQ12872 951 aaKnown RBP21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 PAQR3Q6TCH7 311 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 AFTPHQ6ULP2 937 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 CFAP52Q8N1V2 620 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 FBXO39Q8N4B4 442 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 ANKFN1Q8N957 763 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 LRCH3Q96II8 777 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 TAS2R13Q9NYV9 303 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 SEPT3Q9UH03 358 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 RNF112Q9ULX5 631 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 ZNF510Q9Y2H8 683 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 RNF11Q9Y3C5 154 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 SPO11Q9Y5K1 396 aa21.54■■□□□ 1.04
SH2D3A-201ENST00000245908 MYOCOSA0A1B0GUC4 107 aa21.53■■□□□ 1.04
SH2D3A-201ENST00000245908 UBA6A0AVT1 1052 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms