RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 FSD1LQ9BXM9 530 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 TRIM8Q9BZR9 551 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 UNC93B1Q9H1C4 597 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 ANKRD34BA5PLL1 514 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 BAIAP3O94812 1187 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 MOCS2O96007 188 aaPredicted RBP9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 CCNCP24863 283 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 AXLP30530 894 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 TRPC1P48995 793 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 COPZ1P61923 177 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 RHDQ02161 417 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 IHHQ14623 411 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 RSBN1Q5VWQ0 802 aaPredicted RBP9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 RANBP10Q6VN20 620 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 KCTD8Q6ZWB6 473 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 TMEM126BQ8IUX1 230 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 CADM3Q8N126 398 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 CBR4Q8N4T8 237 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 TSGA13Q96PP4 275 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 CITED4Q96RK1 184 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 RANBP9Q96S59 729 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 IL12RB2Q99665 862 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 RPF2Q9H7B2 306 aaKnown RBP9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 ABCB10Q9NRK6 738 aa9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 FBXO9Q9UK97 447 aaPredicted RBP9.39□□□□□ -0.91
HLA-DOA-201ENST00000229829 OR51F1A6NGY5 319 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 B4GAT1O43505 415 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 PAGE1O75459 146 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 GPC4O75487 556 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 IPO13O94829 963 aaKnown RBP9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 CLK3P49761 638 aaKnown RBP9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 RAB39AQ14964 217 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 PHKG1Q16816 387 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 ZBED5Q49AG3 693 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 TIGD5Q53EQ6 642 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 C6orf10Q5SRN2 563 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 OTUD3Q5T2D3 398 aaPredicted RBP9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 ARTNQ5T4W7 220 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 PIM3Q86V86 326 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 ZCCHC7Q8N3Z6 543 aaKnown RBP9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 SUN5Q8TC36 379 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 EXT2Q93063 718 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 ALG9Q9H6U8 611 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 TBC1D14Q9P2M4 693 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 NYNRINQ9P2P1 1898 aaKnown RBP9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 ANXA9O76027 345 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 ACADVLP49748 655 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 CDC42EP1Q00587 391 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 FAM83EQ2M2I3 478 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 LDLRAD1Q5T700 205 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 FUNDC1Q8IVP5 155 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 KLHDC8BQ8IXV7 354 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 CANT1Q8WVQ1 401 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 FAR2Q96K12 515 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 RPL10LQ96L21 214 aaKnown RBP9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 EFHD1Q9BUP0 239 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 MEAF6Q9HAF1 191 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 SPC25Q9HBM1 224 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 VPS45Q9NRW7 570 aa9.38□□□□□ -0.91
HLA-DOA-201ENST00000229829 LINC00854A0A1B0GVQ3 168 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 HEATR9A2RTY3 570 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 LRRC14BA6NHZ5 514 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 MRASO14807 208 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 MATN3O15232 486 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SUPT7LO94864 414 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 C8BP07358 591 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 ALDOCP09972 364 aaKnown RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 GRIA3P42263 894 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 LHX1P48742 406 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SCNN1GP51170 649 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SLC7A2P52569 658 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SLC13A2Q13183 592 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 STX5Q13190 355 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 USP41Q3LFD5 358 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 PAGE2BQ5JRK9 111 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 GPR158Q5T848 1215 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 IQSEC1Q6DN90 963 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 LRRTM3Q86VH5 581 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 RETREG3Q86VR2 466 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 PEX5LQ8IYB4 626 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SMARCD1Q96GM5 515 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 FCRL2Q96LA5 508 aaPredicted RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 ZNF597Q96LX8 424 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 ZNF408Q9H9D4 720 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 AASDHPPTQ9NRN7 309 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 OLAHQ9NV23 265 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SUCOQ9UBS9 1254 aaKnown RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 CD300AQ9UGN4 299 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SLC8A2Q9UPR5 921 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 TRAF6Q9Y4K3 522 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 KCTD3Q9Y597 815 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SOCS2O14508 198 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 ALDH2P05091 517 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 SNRPB2P08579 225 aaKnown RBP9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 BRCC3P46736 316 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 ARSDP51689 593 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 CDKN2DP55273 166 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 WNT3AP56704 352 aa9.37□□□□□ -0.91
HLA-DOA-201ENST00000229829 DNAJB13P59910 316 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms