RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 ACSS2Q9NR19 701 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 MRPL17Q9NRX2 175 aaKnown RBP16.8■□□□□ 0.28
GAPDH-201ENST00000229239 EPOPA6NHQ4 379 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 GOLGA8CPA6NN73 597 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 SYCE1LA8MT33 242 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 BUD23O43709 281 aaKnown RBP16.8■□□□□ 0.28
GAPDH-201ENST00000229239 TBL1XO60907 577 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 CD160O95971 181 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 FGF4P08620 206 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 ATP4BP51164 291 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 ADARP55265 1226 aaKnown RBP16.8■□□□□ 0.28
GAPDH-201ENST00000229239 AP1S1P61966 158 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 STX5Q13190 355 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 SQLEQ14534 574 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 PTPRCAPQ14761 206 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 PGAM4Q8N0Y7 254 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 PTERQ96BW5 349 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 PHF21BQ96EK2 531 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 TMA16Q96EY4 203 aaKnown RBP16.8■□□□□ 0.28
GAPDH-201ENST00000229239 NSMCE3Q96MG7 304 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 FEM1AQ9BSK4 669 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 S100A14Q9HCY8 104 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 NMRK1Q9NWW6 199 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 DNMT3BQ9UBC3 853 aaKnown RBP16.8■□□□□ 0.28
GAPDH-201ENST00000229239 LHX3Q9UBR4 397 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 LRCH1Q9Y2L9 728 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 TRAF6Q9Y4K3 522 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 OR51B4Q9Y5P0 310 aa16.8■□□□□ 0.28
GAPDH-201ENST00000229239 COPG1Q9Y678 874 aaKnown RBP16.8■□□□□ 0.28
GAPDH-201ENST00000229239 CUL9Q8IWT3 2517 aa16.79■□□□□ 0.28
GAPDH-201ENST00000229239 GREM1O60565 184 aa16.79■□□□□ 0.28
GAPDH-201ENST00000229239 KERAO60938 352 aa16.79■□□□□ 0.28
GAPDH-201ENST00000229239 RHOBTB1O94844 696 aa16.79■□□□□ 0.28
GAPDH-201ENST00000229239 JUNP05412 331 aaKnown RBP16.79■□□□□ 0.28
GAPDH-201ENST00000229239 MAPK8P45983 427 aa16.79■□□□□ 0.28
GAPDH-201ENST00000229239 CLNS1AP54105 237 aaKnown RBP16.79■□□□□ 0.28
GAPDH-201ENST00000229239 RPL26P61254 145 aaKnown RBP16.79■□□□□ 0.28
GAPDH-201ENST00000229239 ERVK-21P61565 698 aa16.79■□□□□ 0.28
GAPDH-201ENST00000229239 RAD51Q06609 339 aa16.79■□□□□ 0.28
GAPDH-201ENST00000229239 CLYBLQ8N0X4 340 aa16.79■□□□□ 0.28
GAPDH-201ENST00000229239 STK40Q8N2I9 435 aa16.79■□□□□ 0.28
GAPDH-201ENST00000229239 DTX3LQ8TDB6 740 aa16.79■□□□□ 0.28
GAPDH-201ENST00000229239 EXOC2Q96KP1 924 aa16.79■□□□□ 0.28
GAPDH-201ENST00000229239 CATSPER2Q96P56 530 aa16.79■□□□□ 0.28
GAPDH-201ENST00000229239 ATOH8Q96SQ7 321 aa16.79■□□□□ 0.28
GAPDH-201ENST00000229239 POLR3BQ9NW08 1133 aaPredicted RBP16.79■□□□□ 0.28
GAPDH-201ENST00000229239 LSM7Q9UK45 103 aaKnown RBP16.79■□□□□ 0.28
GAPDH-201ENST00000229239 OAS3Q9Y6K5 1087 aaKnown RBP16.79■□□□□ 0.28
GAPDH-201ENST00000229239 FZD6O60353 706 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 SRP72O76094 671 aaKnown RBP16.78■□□□□ 0.28
GAPDH-201ENST00000229239 SUPT7LO94864 414 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 PFKLP17858 780 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 NUDT2P50583 147 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 EPHB1P54762 984 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 SESN3P58005 492 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 ART3Q13508 389 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 UNC50Q53HI1 259 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 MPP7Q5T2T1 576 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 CARNMT1Q8N4J0 409 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 WBP2Q969T9 261 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 PPP1R36Q96LQ0 422 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 IL21Q9HBE4 155 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 POMPQ9Y244 141 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 PCDHGC4Q9Y5F7 938 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 UBA6A0AVT1 1052 aaPredicted RBP16.78■□□□□ 0.28
GAPDH-201ENST00000229239 TMEM233B4DJY2 109 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 AIM2O14862 343 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 STX7O15400 261 aaKnown RBP16.78■□□□□ 0.28
GAPDH-201ENST00000229239 VPS26AO75436 327 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 GPC4O75487 556 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 PDHA1P08559 390 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 KCNC1P48547 511 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 PLK1P53350 603 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 RHOAP61586 193 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 XIAPP98170 497 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 TRAF2Q12933 501 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 CDC16Q13042 620 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 RETSATQ6NUM9 610 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 UGT3A1Q6NUS8 523 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 TXNDC11Q6PKC3 985 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 BNC2Q6ZN30 1099 aaPredicted RBP16.78■□□□□ 0.28
GAPDH-201ENST00000229239 HOMEZQ8IX15 550 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 DSELQ8IZU8 1212 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 CPXM2Q8N436 756 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 TTC30BQ8N4P2 665 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 NRG4Q8WWG1 115 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 C17orf80Q9BSJ5 609 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 MAGEE1Q9HCI5 957 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 PFDN4Q9NQP4 134 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 SMPD4Q9NXE4 827 aa16.78■□□□□ 0.28
GAPDH-201ENST00000229239 UBDO15205 165 aa16.77■□□□□ 0.27
GAPDH-201ENST00000229239 VPS4BO75351 444 aa16.77■□□□□ 0.27
GAPDH-201ENST00000229239 PKMP14618 531 aaKnown RBP16.77■□□□□ 0.27
GAPDH-201ENST00000229239 HDCP19113 662 aa16.77■□□□□ 0.27
GAPDH-201ENST00000229239 POU3F3P20264 500 aaPredicted RBP16.77■□□□□ 0.27
GAPDH-201ENST00000229239 CSNK1DP48730 415 aa16.77■□□□□ 0.27
GAPDH-201ENST00000229239 ACADVLP49748 655 aa16.77■□□□□ 0.27
GAPDH-201ENST00000229239 CDH18Q13634 790 aa16.77■□□□□ 0.27
GAPDH-201ENST00000229239 TMEM198Q66K66 360 aa16.77■□□□□ 0.27
GAPDH-201ENST00000229239 CERS6Q6ZMG9 384 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms