RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 USP51Q70EK9 711 aa12.37□□□□□ -0.43
NUP88-201ENST00000225696 MYLPFQ96A32 169 aa12.37□□□□□ -0.43
NUP88-201ENST00000225696 TMEM209Q96SK2 561 aa12.37□□□□□ -0.43
NUP88-201ENST00000225696 ALG2Q9H553 416 aa12.37□□□□□ -0.43
NUP88-201ENST00000225696 ZFYVE28Q9HCC9 887 aa12.37□□□□□ -0.43
NUP88-201ENST00000225696 VTA1Q9NP79 307 aa12.37□□□□□ -0.43
NUP88-201ENST00000225696 NT5MQ9NPB1 228 aa12.37□□□□□ -0.43
NUP88-201ENST00000225696 PFDN4Q9NQP4 134 aa12.37□□□□□ -0.43
NUP88-201ENST00000225696 INTS7Q9NVH2 962 aaKnown RBP12.37□□□□□ -0.43
NUP88-201ENST00000225696 SELENONQ9NZV5 590 aa12.37□□□□□ -0.43
NUP88-201ENST00000225696 IFT80Q9P2H3 777 aaPredicted RBP12.37□□□□□ -0.43
NUP88-201ENST00000225696 FUOMA2VDF0 154 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 BBIP1A8MTZ0 92 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 ZNF189O75820 626 aaPredicted RBP12.36□□□□□ -0.43
NUP88-201ENST00000225696 MMP2P08253 660 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 NR4A1P22736 598 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 HRH2P25021 359 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 MAGEA8P43361 318 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 SERPINH1P50454 418 aaKnown RBP12.36□□□□□ -0.43
NUP88-201ENST00000225696 ADARB1P78563 741 aaKnown RBP12.36□□□□□ -0.43
NUP88-201ENST00000225696 DSC2Q02487 901 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 RELAQ04206 551 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 ITKQ08881 620 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 SLC10A7Q0GE19 358 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 NFATC3Q12968 1075 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 PRAMEF19Q5SWL8 479 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 BTLAQ7Z6A9 289 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 CCDC117Q8IWD4 279 aaPredicted RBP12.36□□□□□ -0.43
NUP88-201ENST00000225696 CENPSQ8N2Z9 138 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 BPIFB6Q8NFQ5 453 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 CASP10Q92851 521 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 LPPQ93052 612 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 PABPC5Q96DU9 382 aaKnown RBP12.36□□□□□ -0.43
NUP88-201ENST00000225696 VPS50Q96JG6 964 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 COX4I2Q96KJ9 171 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 TRMOQ9BU70 441 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 FANCEQ9HB96 536 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 RGS18Q9NS28 235 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 TBC1D23Q9NUY8 699 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 COQ6Q9Y2Z9 468 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 PCDHGA4Q9Y5G9 962 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 CXCL11O14625 94 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 AXIN1O15169 862 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 IGLV3-25P01717 112 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 HAPLN1P10915 354 aaPredicted RBP12.36□□□□□ -0.43
NUP88-201ENST00000225696 GJA5P36382 358 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 RXRGP48443 463 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 UFM1P61960 85 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 ZNF33AQ06730 810 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 AAK1Q2M2I8 961 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 LDLRAP1Q5SW96 308 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 TMTC4Q5T4D3 741 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 MANEALQ5VSG8 457 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 KANK2Q63ZY3 851 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 ANKRD34AQ69YU3 496 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 TWF2Q6IBS0 349 aaKnown RBP12.36□□□□□ -0.43
NUP88-201ENST00000225696 TFAP2DQ7Z6R9 452 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 DCBLD1Q8N8Z6 715 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 NLGN2Q8NFZ4 835 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 ZNF420Q8TAQ5 688 aaPredicted RBP12.36□□□□□ -0.43
NUP88-201ENST00000225696 BORCS5Q969J3 196 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 TBATAQ96M53 351 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 GAD1Q99259 594 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 PRKD2Q9BZL6 878 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 NTN4Q9HB63 628 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 ATP13A1Q9HD20 1204 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 SEMA4BQ9NPR2 832 aaPredicted RBP12.36□□□□□ -0.43
NUP88-201ENST00000225696 KCNH4Q9UQ05 1017 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 GPR45Q9Y5Y3 372 aa12.36□□□□□ -0.43
NUP88-201ENST00000225696 TMEM221A6NGB7 291 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 CASTOR2A6NHX0 329 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 UNCXA6NJT0 531 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 DYNC1LI2O43237 492 aaPredicted RBP12.35□□□□□ -0.43
NUP88-201ENST00000225696 ADAM23O75077 832 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 CLASP2O75122 1294 aaKnown RBP12.35□□□□□ -0.43
NUP88-201ENST00000225696 SERPINB7O75635 380 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 PIRTP0C851 137 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 PCNAP12004 261 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 HOXD8P13378 290 aaPredicted RBP12.35□□□□□ -0.43
NUP88-201ENST00000225696 PORP16435 677 aaPredicted RBP12.35□□□□□ -0.43
NUP88-201ENST00000225696 OR4D2P58180 307 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 PIGFQ07326 219 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 BNIP2Q12982 314 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 NFYCQ13952 458 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 DUSP28Q4G0W2 176 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 XAF1Q6GPH4 301 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 LRRTM3Q86VH5 581 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 RALGPS2Q86X27 583 aaPredicted RBP12.35□□□□□ -0.43
NUP88-201ENST00000225696 DCP1BQ8IZD4 617 aaKnown RBP12.35□□□□□ -0.43
NUP88-201ENST00000225696 OR13F1Q8NGS4 319 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 SNX19Q92543 992 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 ESAMQ96AP7 390 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 BIRC7Q96CA5 298 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 SMARCD1Q96GM5 515 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 ACOX2Q99424 681 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 KCTD14Q9BQ13 255 aaPredicted RBP12.35□□□□□ -0.43
NUP88-201ENST00000225696 C1orf50Q9BV19 199 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 MRGBPQ9NV56 204 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 MIA3Q5JRA6 1907 aa12.35□□□□□ -0.43
NUP88-201ENST00000225696 MBLAC1A4D2B0 266 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms