RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 BBOF1Q8ND07 529 aa23.52■■□□□ 1.36
HOMER3-201ENST00000221222 OR4K2Q8NGD2 314 aa23.52■■□□□ 1.36
HOMER3-201ENST00000221222 LRRC1Q9BTT6 524 aa23.52■■□□□ 1.36
HOMER3-201ENST00000221222 NUSAP1Q9BXS6 441 aaKnown RBP23.52■■□□□ 1.36
HOMER3-201ENST00000221222 RIMKLBQ9ULI2 386 aa23.52■■□□□ 1.36
HOMER3-201ENST00000221222 SNX24Q9Y343 169 aa23.52■■□□□ 1.36
HOMER3-201ENST00000221222 UTP11Q9Y3A2 253 aaKnown RBP23.52■■□□□ 1.36
HOMER3-201ENST00000221222 A0A1B0GVT2 93 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 GOLGA8MH3BSY2 632 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 TP73O15350 636 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 HOXC4P09017 264 aaPredicted RBP23.51■■□□□ 1.35
HOMER3-201ENST00000221222 SPAM1P38567 509 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 NXPH1P58417 271 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 SEPT6Q14141 434 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 PTPRCAPQ14761 206 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 RAET1GQ6H3X3 334 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 ADAMTSL4Q6UY14 1074 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 SLC22A18ASQ8N1D0 253 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 STYXQ8WUJ0 223 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 ZSCAN5AQ9BUG6 496 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 APOOQ9BUR5 198 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 TEX101Q9BY14 249 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 FRMD8Q9BZ67 464 aaPredicted RBP23.51■■□□□ 1.35
HOMER3-201ENST00000221222 IL26Q9NPH9 171 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 WHRNQ9P202 907 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 ANKRD6Q9Y2G4 727 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 TCAF1Q9Y4C2 921 aa23.51■■□□□ 1.35
HOMER3-201ENST00000221222 ADAMTS9Q9P2N4 1935 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 KNL1Q8NG31 2342 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 CNOT1A5YKK6 2376 aaKnown RBP23.5■■□□□ 1.35
HOMER3-201ENST00000221222 HADHAP40939 763 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 GPR1P46091 355 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 ITGA8P53708 1063 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 C21orf59P57076 290 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 IRX4P78413 519 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 BNC1Q01954 994 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 GLE1Q53GS7 698 aaKnown RBP23.5■■□□□ 1.35
HOMER3-201ENST00000221222 PCID2Q5JVF3 399 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 PDPK2PQ6A1A2 396 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 NLRP9Q7RTR0 991 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 TRAM1L1Q8N609 369 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 PPHLN1Q8NEY8 458 aaKnown RBP23.5■■□□□ 1.35
HOMER3-201ENST00000221222 OR13C4Q8NGS5 318 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 PTCD2Q8WV60 388 aaKnown RBP23.5■■□□□ 1.35
HOMER3-201ENST00000221222 PEX13Q92968 403 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 AGAP2Q99490 1192 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 ZDHHC5Q9C0B5 715 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 WDR26Q9H7D7 661 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 RXFP3Q9NSD7 469 aa23.5■■□□□ 1.35
HOMER3-201ENST00000221222 NLE1Q9NVX2 485 aaPredicted RBP23.5■■□□□ 1.35
HOMER3-201ENST00000221222 TPRP12270 2363 aaKnown RBP23.5■■□□□ 1.35
HOMER3-201ENST00000221222 H7C0S8 307 aa23.49■■□□□ 1.35
HOMER3-201ENST00000221222 AVILO75366 819 aa23.49■■□□□ 1.35
HOMER3-201ENST00000221222 MGAT1P26572 445 aa23.49■■□□□ 1.35
HOMER3-201ENST00000221222 CTSKP43235 329 aa23.49■■□□□ 1.35
HOMER3-201ENST00000221222 DRG2P55039 364 aaKnown RBP23.49■■□□□ 1.35
HOMER3-201ENST00000221222 GRIK2Q13002 908 aa23.49■■□□□ 1.35
HOMER3-201ENST00000221222 KIF19Q2TAC6 998 aa23.49■■□□□ 1.35
HOMER3-201ENST00000221222 CCDC38Q502W7 563 aa23.49■■□□□ 1.35
HOMER3-201ENST00000221222 ALS2CLQ60I27 953 aa23.49■■□□□ 1.35
HOMER3-201ENST00000221222 TCEAL6Q6IPX3 200 aa23.49■■□□□ 1.35
HOMER3-201ENST00000221222 SPATS2Q86XZ4 545 aaKnown RBP23.49■■□□□ 1.35
HOMER3-201ENST00000221222 TMEM131Q92545 1883 aa23.49■■□□□ 1.35
HOMER3-201ENST00000221222 TCEAL3Q969E4 200 aa23.49■■□□□ 1.35
HOMER3-201ENST00000221222 FUBP1Q96AE4 644 aaKnown RBP23.49■■□□□ 1.35
HOMER3-201ENST00000221222 DNAJC1Q96KC8 554 aaKnown RBP23.49■■□□□ 1.35
HOMER3-201ENST00000221222 DPH5Q9H2P9 285 aa23.49■■□□□ 1.35
HOMER3-201ENST00000221222 ANAPC5Q9UJX4 755 aa23.49■■□□□ 1.35
HOMER3-201ENST00000221222 OR1A2Q9Y585 309 aa23.49■■□□□ 1.35
HOMER3-201ENST00000221222 GLYATL1P3A0A0U1RQE8 302 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 SPTY2D1-AS1A0A0U1RR47 76 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 FADS2P1A8MWK0 482 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 GAPDHSO14556 408 aaPredicted RBP23.48■■□□□ 1.35
HOMER3-201ENST00000221222 ARHGAP33O14559 1287 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 FOXD2O60548 495 aaPredicted RBP23.48■■□□□ 1.35
HOMER3-201ENST00000221222 SYPP08247 313 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 KIAA1024LP59773 190 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 ACVR1Q04771 509 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 PDE1CQ14123 709 aaPredicted RBP23.48■■□□□ 1.35
HOMER3-201ENST00000221222 SKIDA1Q1XH10 827 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 PPM1JQ5JR12 505 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 TSTD2Q5T7W7 516 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 HEATR4Q86WZ0 1026 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 SEC14L1Q92503 715 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 KIFC1Q9BW19 673 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 SPATA16Q9BXB7 569 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 MRM3Q9HC36 420 aaKnown RBP23.48■■□□□ 1.35
HOMER3-201ENST00000221222 SYBUQ9NX95 663 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 GRHL1Q9NZI5 618 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 FKBPLQ9UIM3 349 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 APPL1Q9UKG1 709 aa23.48■■□□□ 1.35
HOMER3-201ENST00000221222 SDR42E2A6NKP2 422 aa23.47■■□□□ 1.35
HOMER3-201ENST00000221222 BHMG1C9JSJ3 638 aaPredicted RBP23.47■■□□□ 1.35
HOMER3-201ENST00000221222 MYCLP1P12525 358 aaPredicted RBP23.47■■□□□ 1.35
HOMER3-201ENST00000221222 THOP1P52888 689 aa23.47■■□□□ 1.35
HOMER3-201ENST00000221222 CRADDP78560 199 aa23.47■■□□□ 1.35
HOMER3-201ENST00000221222 XIAPP98170 497 aa23.47■■□□□ 1.35
HOMER3-201ENST00000221222 CDK3Q00526 305 aa23.47■■□□□ 1.35
HOMER3-201ENST00000221222 CALCOCO2Q13137 446 aa23.47■■□□□ 1.35
HOMER3-201ENST00000221222 PTK2BQ14289 1009 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms