RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 PPP5CP53041 499 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 BRMS1LQ5PSV4 323 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 CEP350Q5VT06 3117 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 ARHGAP17Q68EM7 881 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 ZNF773Q6PK81 442 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 FIP1L1Q6UN15 594 aaKnown RBP13.6□□□□□ -0.23
GABPB1-201ENST00000220429 PLD5Q8N7P1 536 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 C7orf31Q8N865 590 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 PPWD1Q96BP3 646 aaKnown RBP13.6□□□□□ -0.23
GABPB1-201ENST00000220429 SNRNP25Q9BV90 132 aaKnown RBP13.6□□□□□ -0.23
GABPB1-201ENST00000220429 IFT22Q9H7X7 185 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 PNPOQ9NVS9 261 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 ACTR3BQ9P1U1 418 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 XPO7Q9UIA9 1087 aaKnown RBP13.6□□□□□ -0.23
GABPB1-201ENST00000220429 SLCO3A1Q9UIG8 710 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 TMCC3Q9ULS5 477 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 PDZK1P1A8MUH7 402 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 STX16-NPEPL1H3BU86 382 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 UGT2B11O75310 529 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 UPK1BO75841 260 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 CELF2O95319 508 aaKnown RBP13.6□□□□□ -0.23
GABPB1-201ENST00000220429 CLIC3O95833 236 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 IMPDH1P20839 514 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 LMO2P25791 158 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 HAAOP46952 286 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 PDK2Q15119 407 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 PCBP1Q15365 356 aaKnown RBP eCLIP13.6□□□□□ -0.23
GABPB1-201ENST00000220429 FBXO47Q5MNV8 452 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 ZNF600Q6ZNG1 722 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 METTL3Q86U44 580 aaKnown RBP13.6□□□□□ -0.23
GABPB1-201ENST00000220429 HID1Q8IV36 788 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 ANKFN1Q8N957 763 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 GALNT11Q8NCW6 608 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 FAM156AQ8NDB6 213 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 FLCNQ8NFG4 579 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 LRRC20Q8TCA0 184 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.6□□□□□ -0.23
GABPB1-201ENST00000220429 IER2Q9BTL4 223 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 YTHDF1Q9BYJ9 559 aaKnown RBP13.6□□□□□ -0.23
GABPB1-201ENST00000220429 MUC3BQ9H195 1237 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 NPAP1Q9NZP6 1156 aa13.6□□□□□ -0.23
GABPB1-201ENST00000220429 ZNF638Q14966 1978 aaKnown RBP13.6□□□□□ -0.23
GABPB1-201ENST00000220429 SEMA3DO95025 777 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 SNRPAP09012 282 aaKnown RBP13.59□□□□□ -0.23
GABPB1-201ENST00000220429 CD1EP15812 388 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 DPP6P42658 865 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 PLA2G16P53816 162 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 RHDQ02161 417 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 SOX4Q06945 474 aaPredicted RBP13.59□□□□□ -0.23
GABPB1-201ENST00000220429 MAP2K5Q13163 448 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 UBXN11Q5T124 520 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 ZNF544Q6NX49 715 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 ZNF438Q7Z4V0 828 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 C2orf69Q8N8R5 385 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 TDRD5Q8NAT2 981 aaKnown RBP13.59□□□□□ -0.23
GABPB1-201ENST00000220429 OR6Q1Q8NGQ2 317 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 PCDH19Q8TAB3 1148 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 CYGBQ8WWM9 190 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 DACH2Q96NX9 599 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 UHRF1Q96T88 793 aaPredicted RBP13.59□□□□□ -0.23
GABPB1-201ENST00000220429 RHOBTB2Q9BYZ6 727 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 TRIM15Q9C019 465 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 WDR41Q9HAD4 459 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 GOLGA2P5Q9HBQ8 144 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 IFT80Q9P2H3 777 aaPredicted RBP13.59□□□□□ -0.23
GABPB1-201ENST00000220429 WARS2Q9UGM6 360 aaKnown RBP13.59□□□□□ -0.23
GABPB1-201ENST00000220429 RGSL1A5PLK6 1076 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 C16orf96A6NNT2 1141 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 HAS3O00219 553 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 PEX14O75381 377 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 FAM155BO75949 473 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 KRT37O76014 449 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 RALBP11234 206 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 HOXB1P14653 301 aaPredicted RBP13.59□□□□□ -0.23
GABPB1-201ENST00000220429 ADORA2BP29275 332 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 ATP5OP48047 213 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 PSEN2P49810 448 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 CAMK1DQ8IU85 385 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 LGI2Q8N0V4 545 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 PDIK1LQ8N165 341 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 PACRGLQ8N7B6 248 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 MARVELD3Q96A59 401 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 FKBP10Q96AY3 582 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 SLCO4A1Q96BD0 722 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 FBXL20Q96IG2 436 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 TBCBQ99426 244 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 COQ3Q9NZJ6 369 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 TMEM216Q9P0N5 145 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 PCDHGB3Q9Y5G1 929 aa13.59□□□□□ -0.23
GABPB1-201ENST00000220429 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.58□□□□□ -0.24
GABPB1-201ENST00000220429 TCRBV9S1A1TA0A576 114 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 KPNA7A9QM74 516 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 ZNF195O14628 629 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 MDM4O15151 490 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 SYNCRIPO60506 623 aaKnown RBP13.58□□□□□ -0.24
GABPB1-201ENST00000220429 MAP3K6O95382 1288 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 PTTG1O95997 202 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 TSHRP16473 764 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 AXLP30530 894 aa13.58□□□□□ -0.24
GABPB1-201ENST00000220429 CYP2C18P33260 490 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms