RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 LRRC58Q96CX6 371 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 C1orf74Q96LT6 269 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 ASB2Q96Q27 587 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 ADI1Q9BV57 179 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 ABT1Q9ULW3 272 aaKnown RBP17.22■□□□□ 0.35
USB1-201ENST00000219281 A0A087WXM4 84 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 TMEM88BA6NKF7 163 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 H3BMM5 538 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 M0QZQ0 153 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 CD3EAPO15446 510 aaKnown RBP17.22■□□□□ 0.35
USB1-201ENST00000219281 PFDN1O60925 122 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 MTHFD2P13995 350 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 LBPP18428 481 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 MYF6P23409 242 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 APLP1P51693 650 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 MERTKQ12866 999 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 BNIP2Q12982 314 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 LPIN1Q14693 890 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 MYBPC3Q14896 1274 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 KCTD21Q4G0X4 260 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 FBXO48Q5FWF7 155 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 LCN8Q6JVE9 175 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 GPR141Q7Z602 305 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 CLVS1Q8IUQ0 354 aaPredicted RBP17.22■□□□□ 0.35
USB1-201ENST00000219281 ARRDC2Q8TBH0 407 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 BLOC1S5Q8TDH9 187 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 FEM1CQ96JP0 617 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 ZYG11BQ9C0D3 744 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 GID8Q9NWU2 228 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 ACTR3BQ9P1U1 418 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 CIDEBQ9UHD4 219 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 POLG2Q9UHN1 485 aa17.22■□□□□ 0.35
USB1-201ENST00000219281 A0A1B0GTL3 188 aa17.21■□□□□ 0.35
USB1-201ENST00000219281 ARPC2O15144 300 aa17.21■□□□□ 0.35
USB1-201ENST00000219281 GFAPP14136 432 aa17.21■□□□□ 0.35
USB1-201ENST00000219281 ELNP15502 786 aa17.21■□□□□ 0.35
USB1-201ENST00000219281 RHOQP17081 205 aa17.21■□□□□ 0.35
USB1-201ENST00000219281 DSC3Q14574 896 aa17.21■□□□□ 0.35
USB1-201ENST00000219281 ZNF683Q8IZ20 524 aa17.21■□□□□ 0.35
USB1-201ENST00000219281 ADGRG5Q8IZF4 528 aa17.21■□□□□ 0.35
USB1-201ENST00000219281 PRDM5Q9NQX1 630 aaPredicted RBP17.21■□□□□ 0.35
USB1-201ENST00000219281 FNIP2Q9P278 1114 aa17.21■□□□□ 0.35
USB1-201ENST00000219281 EBF1Q9UH73 591 aa17.21■□□□□ 0.35
USB1-201ENST00000219281 OAZ3Q9UMX2 235 aa17.21■□□□□ 0.35
USB1-201ENST00000219281 TANC1Q9C0D5 1861 aa17.21■□□□□ 0.35
USB1-201ENST00000219281 A0A0U1RQF3 1178 aa17.21■□□□□ 0.34
USB1-201ENST00000219281 LOC285095A0A1B0GVY8 99 aa17.21■□□□□ 0.34
USB1-201ENST00000219281 CCDC162PA2VCL2 907 aa17.21■□□□□ 0.34
USB1-201ENST00000219281 CLASP2O75122 1294 aaKnown RBP17.21■□□□□ 0.34
USB1-201ENST00000219281 MTHFD1P11586 935 aaKnown RBP17.21■□□□□ 0.34
USB1-201ENST00000219281 ZNF37AP17032 561 aaPredicted RBP17.21■□□□□ 0.34
USB1-201ENST00000219281 SOX11P35716 441 aa17.21■□□□□ 0.34
USB1-201ENST00000219281 MS4A13Q5J8X5 152 aa17.21■□□□□ 0.34
USB1-201ENST00000219281 IFNEQ86WN2 208 aa17.21■□□□□ 0.34
USB1-201ENST00000219281 OR13C4Q8NGS5 318 aa17.21■□□□□ 0.34
USB1-201ENST00000219281 CYGBQ8WWM9 190 aa17.21■□□□□ 0.34
USB1-201ENST00000219281 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.21■□□□□ 0.34
USB1-201ENST00000219281 RPL10LQ96L21 214 aaKnown RBP17.21■□□□□ 0.34
USB1-201ENST00000219281 MYRFLQ96LU7 910 aa17.21■□□□□ 0.34
USB1-201ENST00000219281 C9orf16Q9BUW7 83 aa17.21■□□□□ 0.34
USB1-201ENST00000219281 MUC3BQ9H195 1237 aa17.21■□□□□ 0.34
USB1-201ENST00000219281 SDR39U1Q9NRG7 319 aaPredicted RBP17.21■□□□□ 0.34
USB1-201ENST00000219281 TRMT13Q9NUP7 481 aaKnown RBP17.21■□□□□ 0.34
USB1-201ENST00000219281 RNF186Q9NXI6 227 aa17.21■□□□□ 0.34
USB1-201ENST00000219281 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.21■□□□□ 0.348e-7■■■■□ 23.2
USB1-201ENST00000219281 TLR6Q9Y2C9 796 aa17.21■□□□□ 0.34
USB1-201ENST00000219281 MIA3Q5JRA6 1907 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 MATN4O95460 622 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 CLIC3O95833 236 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 PIRTP0C851 137 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 DIO3P55073 304 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 TBX4P57082 545 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 ESRRGP62508 458 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 ECT2LQ008S8 904 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 ATP6AP1Q15904 470 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 SLC36A3Q495N2 470 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 DNAJB14Q8TBM8 379 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 CENPNQ96H22 339 aaPredicted RBP17.2■□□□□ 0.34
USB1-201ENST00000219281 BIRC8Q96P09 236 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 ATOH8Q96SQ7 321 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 SEMA4BQ9NPR2 832 aaPredicted RBP17.2■□□□□ 0.34
USB1-201ENST00000219281 TMEM248Q9NWD8 314 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 RHBDL2Q9NX52 303 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 TUBA8Q9NY65 449 aaPredicted RBP17.2■□□□□ 0.34
USB1-201ENST00000219281 PCDHA9Q9Y5H5 950 aa17.2■□□□□ 0.34
USB1-201ENST00000219281 PRSS56P0CW18 603 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 PRKAR2AP13861 404 aaKnown RBP17.19■□□□□ 0.34
USB1-201ENST00000219281 EEF1DP29692 281 aaKnown RBP17.19■□□□□ 0.34
USB1-201ENST00000219281 STT3AP46977 705 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 CCT8P50990 548 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 TMED1Q13445 227 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 CYP51A1Q16850 503 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 SLC39A12Q504Y0 691 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 MRNIPQ6NTE8 343 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 BLOC1S3Q6QNY0 202 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 TEX26Q8N6G2 289 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 TNIP2Q8NFZ5 429 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 VPS33AQ96AX1 596 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 TADA1Q96BN2 335 aa17.19■□□□□ 0.34
USB1-201ENST00000219281 SLC39A13Q96H72 371 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms