RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 R4GN57 208 aa27.12■■□□□ 1.93
CHMP4B-201ENST00000217402 GOLGA8KD6RF30 607 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 GOLGA8TH3BQL2 631 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 CTIFO43310 598 aaKnown RBP27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 LILRB5O75023 590 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 SRP72O76094 671 aaKnown RBP27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 GOT2P00505 430 aaKnown RBP27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 ARNTP27540 789 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 SSTR1P30872 391 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 IGFALSP35858 605 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 CLDN2P57739 230 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 DPTQ07507 201 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 SIM2Q14190 667 aaPredicted RBP27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 SLMAPQ14BN4 828 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 STEAP4Q687X5 459 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 PRR23BQ6ZRT6 265 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 UNC5BQ8IZJ1 945 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 ORAI3Q9BRQ5 295 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 NINJ2Q9NZG7 142 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 DMTF1Q9Y222 760 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 FAM169AQ9Y6X4 670 aa27.11■■□□□ 1.93
CHMP4B-201ENST00000217402 PLXNA2O75051 1894 aa27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 H7C0S8 307 aa27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 CD27P26842 260 aa27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 GPR1P46091 355 aa27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 KYNUQ16719 465 aa27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 ZRANB3Q5FWF4 1079 aa27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 UBAP2Q5T6F2 1119 aaKnown RBP27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 AFTPHQ6ULP2 937 aa27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 PTAR1Q7Z6K3 402 aaPredicted RBP27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 RGL4Q8IZJ4 473 aa27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 TRAM1L1Q8N609 369 aa27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 DENND6BQ8NEG7 585 aa27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 LENG8Q96PV6 779 aaPredicted RBP27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 ZSCAN5AQ9BUG6 496 aa27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 FAM96AQ9H5X1 160 aa27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 C20orf96Q9NUD7 363 aaPredicted RBP27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 SLC30A1Q9Y6M5 507 aa27.1■■□□□ 1.93
CHMP4B-201ENST00000217402 ZNF106Q9H2Y7 1883 aaKnown RBP27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 FADS2P1A8MWK0 482 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 PRAMEF26H0Y7S4 382 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 SOD1P00441 154 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 TUBBP07437 444 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 PRSS56P0CW18 603 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 NUDT1P36639 197 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 PTPN5P54829 565 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 INPP5AQ14642 412 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 LONRF1Q17RB8 773 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 ATP13A5Q4VNC0 1218 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 LYSMD4Q5XG99 296 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 PNCKQ6P2M8 343 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 RELL1Q8IUW5 271 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 PRSS33Q8NF86 280 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 SLC6A18Q96N87 628 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 LRRC4CQ9HCJ2 640 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 BPTFQ12830 3046 aa27.09■■□□□ 1.93
CHMP4B-201ENST00000217402 H0Y8X5 98 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 FPGTO14772 594 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 UGT1A9O60656 530 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 UGT1A6P19224 532 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 UGT1A1P22309 533 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 UGT1A4P22310 534 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 UGT1A3P35503 534 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 UGT1A5P35504 534 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 ARCN1P48444 511 aaKnown RBP27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 GPX6P59796 221 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 WDR45BQ5MNZ6 344 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 OTUD6BQ8N6M0 293 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 TMEM145Q8NBT3 493 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 GSDMBQ8TAX9 411 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 SEMA4AQ9H3S1 761 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 ASB8Q9H765 288 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 VPS37BQ9H9H4 285 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 UGT1A7Q9HAW7 530 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 UGT1A10Q9HAW8 530 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 UGT1A8Q9HAW9 530 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 ATXN2Q99700 1313 aaKnown RBP27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 THADAQ6YHU6 1953 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 POM121BA6NF01 834 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 INPP4BO15327 924 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 RHOBTB1O94844 696 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 TSHRP16473 764 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 ITGALP20701 1170 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 ITPKAP23677 461 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 CDKN1CP49918 316 aaPredicted RBP27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 NFATC2Q13469 925 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 LPAL2Q16609 132 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 SPDYCQ5MJ68 293 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 TRMT10BQ6PF06 316 aaKnown RBP27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 GCNT7Q6ZNI0 430 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 C3orf62Q6ZUJ4 267 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 OR4L1Q8NH43 312 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 ZNF398Q8TD17 642 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 AENQ8WTP8 325 aaKnown RBP27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 PPANQ9NQ55 473 aaKnown RBP27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 AASDHPPTQ9NRN7 309 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 OR1A2Q9Y585 309 aa27.08■■□□□ 1.93
CHMP4B-201ENST00000217402 CEP192Q8TEP8 1941 aa27.07■■□□□ 1.92
CHMP4B-201ENST00000217402 ACSL3O95573 720 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms