RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 MAGEE2Q8TD90 523 aaPredicted RBP12.03□□□□□ -0.48
CHPF2-201ENST00000035307 KLK6Q92876 244 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 HAUS8Q9BT25 410 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 C2orf49Q9BVC5 232 aaPredicted RBP12.03□□□□□ -0.48
CHPF2-201ENST00000035307 ELOVL6Q9H5J4 265 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 MTMR10Q9NXD2 777 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 LIMD1Q9UGP4 676 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 NPEPPSL1A6NEC2 478 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 ALDOAP04075 364 aaKnown RBP12.03□□□□□ -0.48
CHPF2-201ENST00000035307 RHOQP17081 205 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 EFNA1P20827 205 aaPredicted RBP12.03□□□□□ -0.48
CHPF2-201ENST00000035307 KPNA1P52294 538 aaPredicted RBP12.03□□□□□ -0.48
CHPF2-201ENST00000035307 PKDCCQ504Y2 493 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 FRMD7Q6ZUT3 714 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 RALGPS2Q86X27 583 aaPredicted RBP12.03□□□□□ -0.48
CHPF2-201ENST00000035307 NRBF2Q96F24 287 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 PPM1MQ96MI6 270 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 GPR21Q99679 349 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 HTATIP2Q9BUP3 242 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 ASPSCR1Q9BZE9 553 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 PARVBQ9HBI1 364 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 MYO10Q9HD67 2058 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 M0QZQ0 153 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 ZBTB14O43829 449 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 ITGB8P26012 769 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 MC4RP32245 332 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 IL2P60568 153 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 DAB2P98082 770 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 CREB5Q02930 508 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 SERPINA13PQ6UXR4 307 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 NET1Q7Z628 596 aaPredicted RBP12.03□□□□□ -0.48
CHPF2-201ENST00000035307 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHPF2-201ENST00000035307 OR4L1Q8NH43 312 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 JADE3Q92613 823 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 LINGO1Q96FE5 620 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 MRPL57Q9BQC6 102 aaKnown RBP12.03□□□□□ -0.48
CHPF2-201ENST00000035307 LINC00597Q9H2U6 94 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 EBF3Q9H4W6 596 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 SCHIP1Q9P0W5 487 aaPredicted RBP12.03□□□□□ -0.48
CHPF2-201ENST00000035307 PDP2Q9P2J9 529 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 SLC25A13Q9UJS0 675 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 SCML2Q9UQR0 700 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 CCDC154A6NI56 674 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 DNAJA2O60884 412 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 H2AFYO75367 372 aaKnown RBP12.03□□□□□ -0.48
CHPF2-201ENST00000035307 OAZ2O95190 189 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 MLNP12872 115 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 ATF6P18850 670 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 SEC13P55735 322 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 ERVFC1P60507 584 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 TCTN1Q2MV58 587 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 POTEHQ6S545 545 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 CHPFQ8IZ52 775 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 IRAK4Q9NWZ3 460 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 MSRAQ9UJ68 235 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 TLR6Q9Y2C9 796 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 AP4S1Q9Y587 144 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 RAI2Q9Y5P3 530 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 U3KQV3 271 aa12.03□□□□□ -0.48
CHPF2-201ENST00000035307 TIMP1P01033 207 aa12.02□□□□□ -0.48
CHPF2-201ENST00000035307 SNRPB2P08579 225 aaKnown RBP12.02□□□□□ -0.48
CHPF2-201ENST00000035307 PRSS56P0CW18 603 aa12.02□□□□□ -0.48
CHPF2-201ENST00000035307 PPP1R8Q12972 351 aaKnown RBP12.02□□□□□ -0.48
CHPF2-201ENST00000035307 C6orf52Q5T4I8 152 aa12.02□□□□□ -0.48
CHPF2-201ENST00000035307 IRGCQ6NXR0 463 aa12.02□□□□□ -0.48
CHPF2-201ENST00000035307 PAOXQ6QHF9 649 aa12.02□□□□□ -0.48
CHPF2-201ENST00000035307 IRGQQ8WZA9 623 aa12.02□□□□□ -0.48
CHPF2-201ENST00000035307 PPP1R2P1Q96PQ5 205 aa12.02□□□□□ -0.48
CHPF2-201ENST00000035307 MCOLN1Q9GZU1 580 aa12.02□□□□□ -0.48
CHPF2-201ENST00000035307 SMOC2Q9H3U7 446 aa12.02□□□□□ -0.48
CHPF2-201ENST00000035307 OSGEPL1Q9H4B0 414 aa12.02□□□□□ -0.48
CHPF2-201ENST00000035307 EBF2Q9HAK2 575 aa12.02□□□□□ -0.48
CHPF2-201ENST00000035307 FBRSL1Q9HCM7 1045 aaKnown RBP12.02□□□□□ -0.48
CHPF2-201ENST00000035307 ARL15Q9NXU5 204 aa12.02□□□□□ -0.48
CHPF2-201ENST00000035307 ZNF180Q9UJW8 692 aa12.02□□□□□ -0.48
CHPF2-201ENST00000035307 TCAF1Q9Y4C2 921 aa12.02□□□□□ -0.48
CHPF2-201ENST00000035307 GNG14A0A1W2PPG7 69 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 ZNF840PA6NDX5 716 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 FAM159BA6NKW6 160 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 HLA-EP13747 358 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 UGT1A6P19224 532 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 POLR2EP19388 210 aaKnown RBP12.02□□□□□ -0.49
CHPF2-201ENST00000035307 UGT1A1P22309 533 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 UGT1A4P22310 534 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 UGT1A3P35503 534 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 UGT1A5P35504 534 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 IRS1P35568 1242 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 CHRNB3Q05901 458 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 VAC14Q08AM6 782 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 GRM2Q14416 872 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 TSNQ15631 228 aaKnown RBP12.02□□□□□ -0.49
CHPF2-201ENST00000035307 C2orf27AQ580R0 203 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 CGB2Q6NT52 195 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 FAM171BQ6P995 826 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 TTC23LQ6PF05 361 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 TOP1MTQ969P6 601 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 FAR2Q96K12 515 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 ZNF570Q96NI8 536 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 CDK15Q96Q40 435 aa12.02□□□□□ -0.49
CHPF2-201ENST00000035307 WRAP53Q9BUR4 548 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms