RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 UGT1A3P35503 534 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 UGT1A5P35504 534 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 AAK1Q2M2I8 961 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 LCN8Q6JVE9 175 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 ZC3H7AQ8IWR0 971 aaKnown RBP13.99□□□□□ -0.17
USH1C-201ENST00000005226 OR13C4Q8NGS5 318 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 OR10T2Q8NGX3 314 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 CALML6Q8TD86 181 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 PSMG2Q969U7 264 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 FEM1CQ96JP0 617 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 SLC25A51Q9H1U9 297 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 SLC52A3Q9NQ40 469 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 UXTQ9UBK9 157 aaPredicted RBP13.99□□□□□ -0.17
USH1C-201ENST00000005226 FAM50BQ9Y247 325 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 PTCH2Q9Y6C5 1203 aa13.99□□□□□ -0.17
USH1C-201ENST00000005226 PDHXO00330 501 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 CLASP2O75122 1294 aaKnown RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 WISP3O95389 354 aaPredicted RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 GOT2P00505 430 aaKnown RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 F2P00734 622 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 CTSHP09668 335 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 HOXD8P13378 290 aaPredicted RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 HSD17B1P14061 328 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 LBPP18428 481 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 EEF1DP29692 281 aaKnown RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 AGTR2P50052 363 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 GALNT1Q10472 559 aaPredicted RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 ATP1A4Q13733 1029 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 SLC14A2Q15849 920 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 ALFQ53S48 1182 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 NANOGP8Q6NSW7 305 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 ABRAXAS1Q6UWZ7 409 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 SPRED1Q7Z699 444 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 SCD5Q86SK9 330 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 CIR1Q86X95 450 aaPredicted RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 RBM12BQ8IXT5 1001 aaKnown RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 TNIP2Q8NFZ5 429 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 SEPT8Q92599 483 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 IMP4Q96G21 291 aaKnown RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 RNF145Q96MT1 663 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 MUS81Q96NY9 551 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 SLC30A3Q99726 388 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 KCTD14Q9BQ13 255 aaPredicted RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 MTG1Q9BT17 334 aaPredicted RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 ALG2Q9H553 416 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 ZFYVE28Q9HCC9 887 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 OAS3Q9Y6K5 1087 aaKnown RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 SUPT3HB4E1H0 165 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 B3GAT3O94766 335 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 IGLV3-25P01717 112 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 CAPGP40121 348 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 RPS9P46781 194 aaKnown RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 ATP4BP51164 291 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 PIGFQ07326 219 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 GALNT3Q14435 633 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 MANEALQ5VSG8 457 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 BLOC1S3Q6QNY0 202 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 KIAA2013Q8IYS2 634 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 SMIM14Q96QK8 99 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 HBEGFQ99075 208 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 TRMOQ9BU70 441 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 SEZ6LQ9BYH1 1024 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 TRIM15Q9C019 465 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 AGO3Q9H9G7 860 aaKnown RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 CSNK1G1Q9HCP0 422 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 OSER1Q9NX31 292 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 SMPD3Q9NY59 655 aaPredicted RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 TUBA8Q9NY65 449 aaPredicted RBP13.98□□□□□ -0.17
USH1C-201ENST00000005226 CORINQ9Y5Q5 1042 aa13.98□□□□□ -0.17
USH1C-201ENST00000005226 ZNF236Q9UL36 1845 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 BRCA1P38398 1863 aaKnown RBP13.97□□□□□ -0.17
USH1C-201ENST00000005226 TCRBV5S2A0A599 114 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 CCDC162PA2VCL2 907 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 CRCPO75575 148 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 RFC2P35250 354 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 OR4D2P58180 307 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 GNA12Q03113 381 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 ZNF33AQ06730 810 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 TIGD2Q4W5G0 525 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 LDLRAP1Q5SW96 308 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 PIK3R6Q5UE93 754 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 ANKRD34AQ69YU3 496 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 GPR142Q7Z601 462 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 LRRC43Q8N309 656 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 PGBD5Q8N414 524 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 PACRGLQ8N7B6 248 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 RTL3Q8N8U3 475 aaKnown RBP13.97□□□□□ -0.17
USH1C-201ENST00000005226 BPIFB6Q8NFQ5 453 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 BIRC7Q96CA5 298 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 FANCEQ9HB96 536 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 SDR39U1Q9NRG7 319 aaPredicted RBP13.97□□□□□ -0.17
USH1C-201ENST00000005226 GID8Q9NWU2 228 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 IFT80Q9P2H3 777 aaPredicted RBP13.97□□□□□ -0.17
USH1C-201ENST00000005226 TSR3Q9UJK0 312 aaKnown RBP13.97□□□□□ -0.17
USH1C-201ENST00000005226 ACTL7AQ9Y615 435 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 UBA6A0AVT1 1052 aaPredicted RBP13.97□□□□□ -0.17
USH1C-201ENST00000005226 ARL5CA6NH57 179 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 BBIP1A8MTZ0 92 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 LDB2O43679 373 aa13.97□□□□□ -0.17
USH1C-201ENST00000005226 SLC2A3P11169 496 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms