RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 MS4A4AQ96JQ5 239 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 RGS17Q9UGC6 210 aaPredicted RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 LEFTY2O00292 366 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 HDAC3O15379 428 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 OGNP20774 298 aaKnown RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 ITPKAP23677 461 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 ARSIQ5FYB1 569 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 UBXN11Q5T124 520 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 DEPDC1Q5TB30 811 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 TMPRSS11BQ86T26 416 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 MMAAQ8IVH4 418 aaKnown RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 MPP5Q8N3R9 675 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 TSC22D3Q99576 134 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 WDR26Q9H7D7 661 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 CAB39LQ9H9S4 337 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 CCDC177Q9NQR7 707 aaPredicted RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 PIGVQ9NUD9 493 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 NUDT4Q9NZJ9 180 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 MRTO4Q9UKD2 239 aaKnown RBP10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 PHF24Q9UPV7 400 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 ANGPT4Q9Y264 503 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 MYH2Q9UKX2 1941 aa10.32□□□□□ -0.76
NIPAL3-201ENST00000003912 STK16O75716 305 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 GOT2P00505 430 aaKnown RBP10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 NTRK1P04629 796 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 ME2P23368 584 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 S100A5P33763 92 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 KCNQ1P51787 676 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 BLVRAP53004 296 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 UBE3AQ05086 875 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 CA9Q16790 459 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 MFSD5Q6N075 450 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 DRICH1Q6PGQ1 229 aaPredicted RBP10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 GPR180Q86V85 440 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 CKAP2Q8WWK9 683 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 METTL21AQ8WXB1 218 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 FCRL5Q96RD9 977 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 SMOQ99835 787 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 PCBD2Q9H0N5 130 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 FKBPLQ9UIM3 349 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 BTRCQ9Y297 605 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 POLR1DQ9Y2S0 133 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 RGPD1P0DJD0 1748 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 NHSL1Q5SYE7 1610 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 C9IYK1 514 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 SLC7A4O43246 635 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 DEAF1O75398 565 aaPredicted RBP10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 TYRP14679 529 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 PPIDQ08752 370 aaKnown RBP10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 CMC1Q7Z7K0 106 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 NRSN1Q8IZ57 195 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 OR2AP1Q8NGE2 309 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 NECTIN4Q96NY8 510 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 BTBD1Q9H0C5 482 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 ZNF711Q9Y462 761 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 RECQL5O94762 991 aaPredicted RBP10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 UBOX5O94941 541 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 C2P06681 752 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 NOVP48745 357 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 MLLT6P55198 1093 aaPredicted RBP10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 XKR4Q5GH76 650 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 SMG8Q8ND04 991 aaKnown RBP10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 ITFG1Q8TB96 612 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 PPCDCQ96CD2 204 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 RAB11FIP5Q9BXF6 653 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 C3orf14Q9HBI5 128 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 SIX4Q9UIU6 781 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 PFDN1O60925 122 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 HOXB2P14652 356 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 BMPR1AP36894 532 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 CCNFP41002 786 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 PRKG2Q13237 762 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 BIKQ13323 160 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 RALGPS1Q5JS13 557 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 CASP12Q6UXS9 341 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 ZBTB49Q6ZSB9 765 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 LRRN4CLQ8ND94 238 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 SLC44A1Q8WWI5 657 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 CENPTQ96BT3 561 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 LRRC4CQ9HCJ2 640 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 MIOSQ9NXC5 875 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 HS3ST4Q9Y661 456 aa10.31□□□□□ -0.76
NIPAL3-201ENST00000003912 IPO13O94829 963 aaKnown RBP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 HIST1H2ABP04908 130 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 SNRPB2P08579 225 aaKnown RBP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 TSPAN8P19075 237 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 DSG1Q02413 1049 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 NAE1Q13564 534 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 GPR33Q49SQ1 333 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 GPAT3Q53EU6 434 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 SH3PXD2AQ5TCZ1 1133 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 ZNF549Q6P9A3 640 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 CCDC81Q6ZN84 652 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 HIST3H2AQ7L7L0 130 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 CMTM8Q8IZV2 173 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 AADATQ8N5Z0 425 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 DPP10Q8N608 796 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 HIST1H2ACQ93077 130 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 GFM2Q969S9 779 aaKnown RBP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 RAD51AP1Q96B01 352 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms