RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Ifrd1P19182 449 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tas2r16P59529 299 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ppm1hQ3UYC0 513 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ssx9Q6XAS3 170 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Itln1bQ80ZA0 313 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Mettl20Q80ZM3 255 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Eva1bQ8K2Y3 164 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Dock6Q8VDR9 2080 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Mrps18aQ99N85 196 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ndc80Q9D0F1 642 aaKnown RBP9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gpatch1Q9DBM1 930 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Zbtb34A2ATY4 518 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Slfn8B1ARD8 910 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gm6408J3QNG1 320 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gm3402K7N5P2 326 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Il4i1O09046 630 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 HmbsP22907 361 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Slc11a1P41251 548 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Thumpd3P97770 505 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Slc24a2Q14BI1 711 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Qsox2Q3TMX7 692 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Mettl17Q3U2U7 461 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 StradaQ3UUJ4 431 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 HadhQ61425 314 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Krt73Q6NXH9 539 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 PapolgQ6PCL9 739 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Olfr533Q7TRT7 320 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Nek5Q7TSC3 627 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gabra5Q8BHJ7 463 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 CenpuQ8C4M7 410 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Nox1Q8CIZ9 591 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Med17Q8VCD5 649 aaKnown RBP9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Olfr1325Q8VF43 315 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Spz1Q99MY0 378 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Fam227aQ9D3V8 625 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Calr3Q9D9Q6 380 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Nif3l1Q9EQ80 376 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Elovl2Q9JLJ4 292 aa9.91□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Znf536Q8K083 1302 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tmem45a2B7ZWJ5 289 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Enthd1E9Q1Z2 618 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gm3594E9Q2A7 267 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Rpl21O09167 160 aaKnown RBP9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cdk7Q03147 346 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 NovQ64299 354 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Nlrp9cQ66X01 1004 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Ip6k1Q6PD10 433 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gm42417Q8K1D0 126 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Gprc6aQ8K4Z6 928 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Osbpl1aQ91XL9 950 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Fam174aQ9D3L0 190 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Csnk1dQ9DC28 415 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 PllpQ9DCU2 182 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Nt5cQ9JM14 200 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Actl7aQ9QY84 440 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Grm3Q9QYS2 879 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tbc1d16A2ABG4 766 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Srpk1O70551 648 aaKnown RBP9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cxcr2P35343 359 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 IduaP48441 634 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Rps3P62908 243 aaKnown RBP9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Grin2cQ01098 1239 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Esrp1Q3US41 680 aaKnown RBP9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Akap14Q3V0I7 536 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 EndouQ3V188 412 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Utp14bQ6EJB6 756 aaKnown RBP9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Klhl5Q6PFE1 708 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Trpm4Q7TN37 1213 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 SnphQ80U23 495 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Tmem259Q8CIV2 574 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Acap1Q8K2H4 740 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Olfr96Q8VFE3 313 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Elp2Q91WG4 831 aaKnown RBP9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 Cldn7Q9Z261 211 aa9.9□□□□□ -0.82
Ccdc38-201ENSMUST00000092215 A0A1L1STL9 112 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Col9a3A2ACT7 680 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ttll9A2APC3 461 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 E9Q0B3 247 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Vmn2r21K7N6Y7 853 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Vmn2r20L7N2B1 853 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 H2-M9O19442 342 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 RxraP28700 467 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Asgr1P34927 284 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Alox12P39655 663 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 HhipQ7TN16 700 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Rspo2Q8BFU0 243 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Parp12Q8BZ20 711 aaKnown RBP9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Fbxo48Q8CAT8 161 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Scamp1Q8K021 338 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Spats2Q8K1N4 545 aaKnown RBP9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 P3h4Q8K2B0 443 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Rnf219Q8K2Y0 722 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Slc35f6Q8VE96 372 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Zmynd10Q99ML0 440 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 PinlypQ9CQD7 212 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Gbe1Q9D6Y9 702 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Alms1Q8K4E0 3251 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Gm10800D3Z496 220 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Gcm2O09102 504 aa9.89□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Tk1P04184 233 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 81.4 ms