RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Zfyve1Q810J8 777 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Q8BGC1 442 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Ap5m1Q8BJ63 490 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Bpifb2Q8C1E1 462 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Prl7b1Q8CGZ9 251 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Impg1Q8R1W8 798 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Vmn1r214Q8R279 367 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Olfr722Q8VFC8 308 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Olfr868Q8VFI8 309 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Lrrc26Q91W20 331 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Clcc1Q99LI2 539 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Ska2Q9CR46 120 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Vkorc1Q9CRC0 161 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Dbndd2Q9CRD4 158 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Tmem225Q9D9S2 230 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Lonp2Q9DBN5 852 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Dgat2Q9DCV3 388 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Vps35Q9EQH3 796 aaKnown RBP12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Dnajb8Q9QYI7 227 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 ReckQ9Z0J1 971 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 RecqlQ9Z129 648 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Dmxl2Q8BPN8 3032 aa12.08□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Igkv6-32A0A140T8N9 115 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Zscan4bE9Q3G0 505 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 5830473C10RikF8VQ07 620 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Vmn2r65G3X931 845 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Vmn2r75G5E8Z7 853 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Agpat1O35083 285 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Igf2bp1O88477 577 aaKnown RBP12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Got2P05202 430 aaKnown RBP12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Prdx1P35700 199 aaKnown RBP12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 PnmtP40935 295 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Pth1rP41593 591 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Capza3P70190 299 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 ElocP83940 112 aaKnown RBP12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Pde1bQ01065 535 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Kcnd1Q03719 651 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 NeblQ0II04 452 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Mdga1Q0PMG2 940 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 GsapQ3TCV3 858 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Fam105aQ3TVP5 353 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Srsf6Q3TWW8 339 aaKnown RBP12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Trip13Q3UA06 432 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Zfp560Q3URI6 754 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Armc5Q5EBP3 926 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Zdhhc20Q5Y5T1 380 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 ChukQ60680 745 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Znf629Q6A085 867 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 RflnaQ7TS73 204 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Dhx33Q80VY9 698 aaKnown RBP12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Slc18a2Q8BRU6 517 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Npsr1Q8BZP8 371 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Pak5Q8C015 719 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Washc5Q8C2E7 1159 aaKnown RBP12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Acat2Q8CAY6 397 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Olfr1233Q8VGN0 305 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Aim2Q91VJ1 354 aaKnown RBP12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Uap1Q91YN5 522 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 L2hgdhQ91YP0 464 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 CoprsQ9CQ13 173 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Cyp2u1Q9CX98 530 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Dtwd2Q9D0U1 298 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Tspan17Q9D7W4 270 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Znf654Q9DAU9 571 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Jag2Q9QYE5 1247 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Zfp407G3UVV3 2246 aa12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Hectd1Q69ZR2 2618 aaKnown RBP12.07□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Zbtb10E9Q8X5 861 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Ptar1E9QAB6 424 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Gm10715J3QP74 227 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Arg2O08691 354 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 TyrobpO54885 114 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Dnmt3aO88508 908 aaKnown RBP12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Cyp1a1P00184 524 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Serpina3kP07759 418 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Spp1P10923 294 aaKnown RBP12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Rps6ka1P18653 724 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 EzrP26040 586 aaKnown RBP12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Cdk4P30285 303 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Drg1P32233 367 aaKnown RBP12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Asgr1P34927 284 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Nkx2-5P42582 318 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Dynlt1P51807 113 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 ClgnP52194 611 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 GemP55041 295 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Pip5k1bP70181 539 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 CdonQ32MD9 1250 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Q3U6N9 222 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Ntrk1Q3UFB7 799 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Defb48Q3UW22 87 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 E2f1Q61501 430 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Panx2Q6IMP4 677 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Tsga10Q6NY15 697 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Parp6Q6P6P7 630 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Nemp1Q6ZQE4 437 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Pnma8aQ80VM8 430 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Creg2Q8BGC9 288 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Cstf2Q8BIQ5 580 aaKnown RBP12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 C130026I21RikQ8C898 291 aa12.06□□□□□ -0.48
Ccdc28a-202ENSMUST00000080860 Ephb1Q8CBF3 984 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms