RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Gm6370A0A0G2JGX9 315 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Olfr316A0A0N4SVP2 306 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Adam34A2RSG8 714 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Lrriq4A6H6A4 596 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Atp6ap1lD3Z5W0 336 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Vmn2r14E9Q759 848 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Gm6309L7N481 315 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 ZfrO88532 1074 aaKnown RBP14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 AldoaP05064 364 aaKnown RBP14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Alox12P39655 663 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Gabrb3P63080 473 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Pde7aP70453 456 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Sox13Q04891 613 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Caprin2Q05A80 1031 aaKnown RBP14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 1810049J17RikQ3V2G9 153 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Olfr318Q5NCD7 306 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 ScinQ60604 715 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Cyp1b1Q64429 543 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Exoc3l4Q6DIA2 721 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Cand2Q6ZQ73 1235 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Rps9Q6ZWN5 194 aaKnown RBP14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 C2cd2lQ80X80 706 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Rbm12b1Q80YR9 836 aaKnown RBP14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Znf775Q8BI73 538 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Rassf2Q8BMS9 326 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Rnf222Q8CEF8 211 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Pacs1Q8K212 961 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Tasp1Q8R1G1 420 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Olfr722Q8VFC8 308 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Prdm9Q96EQ9 843 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Cyc1Q9D0M3 325 aaKnown RBP14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 HaghlQ9DB32 283 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 PllpQ9DCU2 182 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Cmtm7Q9ESD6 167 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Msh5Q9QUM7 833 aa14.65□□□□□ -0.06
Ercc1-201ENSMUST00000003645 Gm28729A0A1B0GSW2 409 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Fam166bA2AIP0 273 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Gcm2O09102 504 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 InhbcP55104 352 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 NcstnP57716 708 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Ebf1Q07802 591 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Hk3Q3TRM8 922 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 SbplQ3TUY3 232 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Serpina3gQ5I2A0 440 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Zdhhc20Q5Y5T1 380 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Htr1aQ64264 421 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Krt73Q6NXH9 539 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 FukQ7TMC8 1090 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Klhl38Q8BSF5 581 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Rbbp5Q8BX09 538 aaKnown RBP14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Fam53cQ8BXQ8 393 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Fam13bQ8K2H3 851 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Pycr2Q922Q4 320 aaKnown RBP14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Cyp4f15Q99N18 534 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Nop56Q9D6Z1 580 aaKnown RBP14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Nif3l1Q9EQ80 376 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Sars2Q9JJL8 518 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Lmx1aQ9JKU8 382 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 CasrQ9QY96 1079 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Ly6g6dQ9Z1Q3 135 aa14.64□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Ighv11-1A0A075B5R6 117 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Ttc7bE9Q6P5 843 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Gm3159K7N760 267 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Dsg2O55111 1122 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Dnmt3aO88508 908 aaKnown RBP14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Serpina3kP07759 418 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Ncam1P13595 1115 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 CtsdP18242 410 aaKnown RBP14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Rfc1P35601 1131 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Pdx1P52946 284 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Lim2P56563 173 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Cdk18Q04899 451 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 InhbaQ04998 424 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 MelkQ61846 643 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Tha1Q6XPS7 400 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Cspg5Q71M36 566 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Sox11Q7M6Y2 395 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 IpmkQ7TT16 396 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Sdad1Q80UZ2 687 aaKnown RBP14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Sema3dQ8BH34 777 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 4932411N23RikQ8C0S0 470 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Slco6c1Q8C0X7 706 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Strip2Q8C9H6 844 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Efcab8Q8C9R9 203 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Fnbp1lQ8K012 605 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 LctlQ8K1F9 566 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Spats2Q8K1N4 545 aaKnown RBP14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Irak3Q8K4B2 609 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Olfr398Q8VFY0 314 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Camk1gQ91VB2 477 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Tbc1d20Q9D9I4 402 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Ndst3Q9EQH7 873 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Hes6Q9JHE6 224 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Pik3cgQ9JHG7 1102 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Adam24Q9R160 761 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Zkscan5Q9Z1D8 819 aa14.63□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Ttll9A2APC3 461 aa14.62□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Gbp4A4UUI3 631 aa14.62□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Gm13119B1ARV5 481 aa14.62□□□□□ -0.07
Ercc1-201ENSMUST00000003645 Lilra5D3Z7A9 295 aa14.62□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms