RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Gdf5P43027 495 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Gli1P47806 1111 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Gucy2eP52785 1108 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Afg1lQ3V384 480 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Rabl6Q5U3K5 725 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Dusp11Q6NXK5 321 aaKnown RBP16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Cyp2r1Q6VVW9 501 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Arhgap26Q6ZQ82 814 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Noc4lQ8BHY2 516 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Dlgap2Q8BJ42 1059 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Slc35e2Q8C811 405 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Vps39Q8R5L3 886 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 4930524N10RikQ9D519 233 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 NplQ9DCJ9 320 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Slco1c1Q9ERB5 715 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Mpp6Q9JLB0 553 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Slc7a8Q9QXW9 531 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 2610008E11RikG3X964 669 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Cyp2b19O55071 492 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 JrkQ60976 557 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Sec22cQ8BXT9 303 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Setd7Q8VHL1 366 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Isoc1Q91V64 297 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Slco1a5Q91YY5 670 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 March2Q99M02 246 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Cnot11Q9CWN7 505 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Tmem80Q9D3H0 123 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Nme4Q9WV84 186 aa16.39■□□□□ 0.21
Shh-201ENSMUST00000002708 Prrt4B2RU40 902 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Slc4a5E9Q3M5 1116 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Cyp2b23E9Q593 491 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Calhm3J3QMI4 347 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Enpp1P06802 906 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Gnrh1P13562 90 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Trpv5P69744 723 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 AnpepP97449 966 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Fmo5P97872 533 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Pnpla1Q3V1D5 599 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Tdpoz3Q717B4 365 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Nim1kQ8BHI9 436 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Thoc5Q8BKT7 683 aaKnown RBP16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Acsm2Q8K0L3 575 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Itfg1Q99KW9 610 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Pbld2Q9CXN7 288 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Rnf181Q9CY62 165 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Tmem135Q9CYV5 458 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 MrrfQ9D6S7 262 aaKnown RBP16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Hmgn3Q9DCB1 99 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 KelQ9EQF2 713 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Olfr1200A2ATJ4 336 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Limk2O54785 638 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Hes2O54792 157 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Rhox6O70238 227 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Tgm2P21981 686 aaKnown RBP16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Tekt4Q149S1 447 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Adora2aQ60613 410 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Dclk2Q6PGN3 756 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Maml1Q6T264 1020 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Samd4bQ80XS6 687 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Cyth4Q80YW0 393 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Smoc2Q8CD91 447 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Nle1Q8VEJ4 485 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Pcdhgc3Q91XX1 934 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 TmlheQ91ZE0 421 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Aco2Q99KI0 780 aaKnown RBP16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Unc50Q9CQ61 259 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Prpsap1Q9D0M1 356 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Cpxm2Q9D2L5 764 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 LrgukQ9D5S7 820 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Wdr46Q9Z0H1 622 aaKnown RBP16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 H2afb2S4R1M3 115 aa16.38■□□□□ 0.21
Shh-201ENSMUST00000002708 Vmn2r57L7N269 863 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Bcl7cO08664 217 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Alox8O35936 677 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Aldh2P47738 519 aaKnown RBP16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Arpp19P56212 112 aaKnown RBP16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Tas2r16P59529 299 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Pip5k1bP70181 539 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Sap25Q1EHW4 186 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Wdr36Q3TAQ9 899 aaKnown RBP16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Usp17laQ61068 526 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 CcncQ62447 283 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Stmnd1Q6P3A1 279 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Rexo4Q6PAQ4 432 aaKnown RBP16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Fstl5Q8BFR2 847 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Ttc39cQ8VE09 580 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Imp4Q8VHZ7 291 aaKnown RBP16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Golm1Q91XA2 393 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Dach2Q925Q8 634 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Dnajb4Q9D832 337 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Isca2Q9DCB8 154 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Gm13941A2AJ38 245 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Cd151O35566 253 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Aff2O55112 1272 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Pou4f1P17208 421 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Hspa1bP17879 642 aaKnown RBP16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 PlaaP27612 794 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Lhx3P50481 400 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Cdh6P97326 790 aa16.37■□□□□ 0.21
Shh-201ENSMUST00000002708 Pnrc1Q3TWH3 297 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms