RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Pcdhb18Q91Y02 792 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Aldh6a1Q9EQ20 535 aaKnown RBP14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Fads2Q9Z0R9 444 aaKnown RBP14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 S100zB9EJL3 99 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Vmn1r39G3UWE6 305 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 ChgbP16014 677 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Mxd1P50538 227 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 AcdQ5EE38 416 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Snx31Q6P8Y7 439 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Olfr1152Q7TR34 310 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 4930503B20RikQ80ZP0 234 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Dennd1aQ8K382 1016 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Topaz1E5FYH1 1653 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Spin2-ps6A0A140T8V2 174 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Gm13089A2AGW7 455 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Gm6460F6YJZ8 199 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 RapsnP12672 412 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Slc35c2Q8VCX2 364 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Caskin2Q8VHK1 1201 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Lgals12Q91VD1 314 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Eif3mQ99JX4 374 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Arl8bQ9CQW2 186 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Armc8Q9DBR3 673 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Aldh9a1Q9JLJ2 494 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Cdh13Q9WTR5 714 aa14.03□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Vmn1r2A2AMT6 306 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Gm7945F6QI24 236 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Btg4O70552 250 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 ShdO88834 343 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Gm4951Q3UED7 406 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Gm8773Q3UQ24 132 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Ubp1Q811S7 540 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Arhgap22Q8BL80 702 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Fmo2Q8K2I3 535 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 BollQ924M5 281 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Tpgs1Q99MS8 303 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Mgrn1Q9D074 532 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Mrps33Q9D2R8 106 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 H2bfmQ9DAB5 224 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 PpieQ9QZH3 301 aaKnown RBP14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Aqp5Q9WTY4 265 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Xlr5aA2BI45 236 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Rnf169E9Q7F2 694 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Dusp8O09112 663 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Ap2a1P17426 977 aaKnown RBP14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 SagP20443 403 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 PctpP53808 214 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Gata5P97489 404 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Klrb1Q0ZUP1 214 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Serpina3gQ5I2A0 440 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Mrm3Q5ND52 418 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Mkrn3Q60764 544 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Slc29a2Q61672 456 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Stmnd1Q6P3A1 279 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Olfr1355Q7TQU9 310 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Creb3l2Q8BH52 521 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Trmt10aQ8C1Z8 328 aaKnown RBP14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 LipmQ8K2A6 422 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Olfr541Q8VGM0 312 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Erp27Q9D8U3 272 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 C5P06684 1680 aa14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Ahnak2E9PYB0 1738 aaKnown RBP14.02□□□□□ -0.16
Col1a1-201ENSMUST00000001547 Gm4985A2ALC6 410 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Ssxb6A2BI74 170 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Nxpe4Q52KP5 543 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Smoc1Q8BLY1 463 aaKnown RBP14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 St7lQ8K4P7 559 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Tspan8Q8R3G9 235 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Akr1c13Q8VC28 323 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Mospd1Q8VEL0 213 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Npm3Q9CPP0 175 aaKnown RBP14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Nusap1Q9ERH4 427 aaKnown RBP14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Tnfrsf25B1AWN9 411 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Gm3259D3YUK0 475 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 MttpO08601 894 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Atn1O35126 1175 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Pdcd1Q02242 288 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Tmem45aQ60774 273 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Sp140Q6NSQ5 534 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Cpsf6Q6NVF9 551 aaKnown RBP14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Smpd4Q6ZPR5 823 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Nrde2Q80XC6 1172 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Pcdhga6Q91XY2 932 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Tas1r3Q925D8 858 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Mtif3Q9CZD5 276 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Oser1Q9D722 291 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Fam83dQ9D7I8 585 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Hipk3Q9ERH7 1192 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 RictorQ6QI06 1708 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Serpina3jD3Z451 420 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Scamp3O35609 349 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Smpd2O70572 419 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Cd247P24161 164 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 LcorlQ3U285 600 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Gm29609Q3UU56 907 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Prkg2Q61410 762 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Nup62Q63850 526 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Gtf3c2Q8BL74 907 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Adgrf1Q8VEC3 908 aa14.02□□□□□ -0.17
Col1a1-201ENSMUST00000001547 Arl10Q9QXJ4 243 aa14.02□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms