RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 OXTRP30559 389 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 MAT2AP31153 395 aaKnown RBP17.42■□□□□ 0.38
PHGDH-230ENST00000641927 MGAT5Q09328 741 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 IFFO1Q0D2I5 559 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 SGCGQ13326 291 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 EFTUD2Q15029 972 aaKnown RBP eCLIP17.42■□□□□ 0.381e-6■■■■□ 25.5
PHGDH-230ENST00000641927 KBTBD12Q3ZCT8 623 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 KIAA1161Q6NSJ0 714 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 TSSK4Q6SA08 328 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 CBARPQ8N350 705 aaPredicted RBP17.42■□□□□ 0.38
PHGDH-230ENST00000641927 TMEM105Q8N8V8 129 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 KLK6Q92876 244 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 NUS1Q96E22 293 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 TOE1Q96GM8 510 aaKnown RBP17.42■□□□□ 0.38
PHGDH-230ENST00000641927 COQ10AQ96MF6 247 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 CYTH2Q99418 400 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 KDM4CQ9H3R0 1056 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 FAM96AQ9H5X1 160 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 RAD18Q9NS91 495 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 CATSPERZQ9NTU4 200 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 PLAAQ9Y263 795 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 INVSQ9Y283 1065 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 SLC30A1Q9Y6M5 507 aa17.42■□□□□ 0.38
PHGDH-230ENST00000641927 EXOC1LA0A1B0GW35 172 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 AXIN1O15169 862 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 SEMA4FO95754 770 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 IGLV3-19P01714 112 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 CD6P30203 668 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 PEX6Q13608 980 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 ZNF284Q2VY69 593 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 KLHL38Q2WGJ6 581 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 FASTKD1Q53R41 847 aaKnown RBP17.41■□□□□ 0.38
PHGDH-230ENST00000641927 NEPROQ6NW34 567 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 MAMSTRQ6ZN01 415 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 HDXQ7Z353 690 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 TECPR1Q7Z6L1 1165 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 HORMAD1Q86X24 394 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 FAM160A2Q8N612 972 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-230ENST00000641927 PPM1NQ8N819 430 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 FRMD1Q8N878 549 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 OR2T34Q8NGX1 318 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 OR2W6PQ8NHA6 318 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 SCAMP4Q969E2 229 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 ZBTB9Q96C00 473 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 AP2M1Q96CW1 435 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 DTD2Q96FN9 168 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 PLEKHG4BQ96PX9 1271 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 AGAP2Q99490 1192 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 C19orf43Q9BQ61 176 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 CCDC77Q9BR77 488 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 FAM167BQ9BTA0 163 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 SPATA16Q9BXB7 569 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 ACSS3Q9H6R3 686 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 SLC17A6Q9P2U8 582 aa17.41■□□□□ 0.38
PHGDH-230ENST00000641927 ZFR2Q9UPR6 939 aaKnown RBP17.41■□□□□ 0.38
PHGDH-230ENST00000641927 RGSL1A5PLK6 1076 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 POC1B-GALNT4F8VUJ3 575 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 H7C0S8 307 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 CD3EAPO15446 510 aaKnown RBP17.4■□□□□ 0.38
PHGDH-230ENST00000641927 SRP72O76094 671 aaKnown RBP17.4■□□□□ 0.38
PHGDH-230ENST00000641927 GM2AP17900 193 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 PSMA3P25788 255 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 XIAPP98170 497 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 FRG1Q14331 258 aaKnown RBP17.4■□□□□ 0.38
PHGDH-230ENST00000641927 CHRNA6Q15825 494 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 ZNF470Q6ECI4 717 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 NEK5Q6P3R8 708 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 TAS2R42Q7RTR8 314 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 NRSN1Q8IZ57 195 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 GABPB2Q8TAK5 448 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-230ENST00000641927 CALML6Q8TD86 181 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 RIOK2Q9BVS4 552 aaKnown RBP17.4■□□□□ 0.38
PHGDH-230ENST00000641927 GPR174Q9BXC1 333 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 EPHX3Q9H6B9 360 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 ASB8Q9H765 288 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 SMYD2Q9NRG4 433 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 NUMA1Q14980 2115 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 SCN8AQ9UQD0 1980 aa17.4■□□□□ 0.38
PHGDH-230ENST00000641927 IGHV1OR15-9A0A0B4J2B8 117 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 FAM159BA6NKW6 160 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 CXorf49A8MYA2 514 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-230ENST00000641927 GPR39O43194 453 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 PAK4O96013 591 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-230ENST00000641927 PRSS56P0CW18 603 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 ITGALP20701 1170 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 PTPN5P54829 565 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 DCDC1P59894 354 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 PPP2CBP62714 309 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 PPP2CAP67775 309 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 CACNG1Q06432 222 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 STAT4Q14765 748 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 SETMARQ53H47 684 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-230ENST00000641927 MRNIPQ6NTE8 343 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 CYS1Q717R9 158 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 CYP2U1Q7Z449 544 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 LDB1Q86U70 411 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-230ENST00000641927 C1orf210Q8IVY1 113 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 FBXL6Q8N531 539 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 ZNF398Q8TD17 642 aa17.39■□□□□ 0.37
PHGDH-230ENST00000641927 SPACA7Q96KW9 195 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms