RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 SNX12Q9UMY4 172 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 EFR3BQ9Y2G0 817 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 HEMK1Q9Y5R4 338 aaPredicted RBP7.44□□□□□ -1.22
PHGDH-225ENST00000641720 HS3ST3A1Q9Y663 406 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 WASF2Q9Y6W5 498 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 POLEQ07864 2286 aa7.44□□□□□ -1.22
PHGDH-225ENST00000641720 CXorf51AA0A1B0GTR3 108 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 TTC24A2A3L6 582 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 D6RAR5 112 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 TPP1O14773 563 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 PLD2O14939 933 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 PPP1R12AO14974 1030 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 ZNF185O15231 689 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 MATN3O15232 486 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 INSIG1O15503 277 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 AQP9O43315 295 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 CEP104O60308 925 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 TJP3O95049 919 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 GSRP00390 522 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 FGGP02679 453 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 HLA-DQB2P05538 268 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 RNF224P0DH78 156 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 LIPCP11150 499 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 HGFP14210 728 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 MX2P20592 715 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 RBMS1P29558 406 aaKnown RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 GKP32189 559 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 CCKBRP32239 447 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 UGT1A5P35504 534 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 MMP13P45452 471 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 NR2C2P49116 596 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 CCNHP51946 323 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 MAXP61244 160 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 RHOAP61586 193 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 HNRNPKP61978 463 aaKnown RBP eCLIP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 IFI35P80217 286 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 AP1B1Q10567 949 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 WASHC5Q12768 1159 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 IHHQ14623 411 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 LBRQ14739 615 aaKnown RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 PDK1Q15118 436 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 IGFBP7Q16270 282 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 SKIDA1Q1XH10 827 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 DEFB133Q30KQ1 61 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 INO80DQ53TQ3 878 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 DPY19L3Q6ZPD9 716 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 Q6ZSR6 202 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 VASH2Q86V25 355 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 ZC3H18Q86VM9 953 aaKnown RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 CCDC13Q8IYE1 715 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 PCDH20Q8N6Y1 951 aaKnown RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 CNTD1Q8N815 330 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 TSEN2Q8NCE0 465 aaKnown RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 CCNYQ8ND76 341 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 SLC35B2Q8TB61 432 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 GRIN3AQ8TCU5 1115 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 CASKIN2Q8WXE0 1202 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 OR8D1Q8WZ84 308 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 P3H4Q92791 437 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 FUBP1Q96AE4 644 aaKnown RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 ISG20Q96AZ6 181 aaKnown RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 TRIM44Q96DX7 344 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 MS4A14Q96JA4 679 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 TBATAQ96M53 351 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 C16orf45Q96MC5 204 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 GDAP1L1Q96MZ0 367 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 ZNF599Q96NL3 588 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 OSBPL9Q96SU4 736 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 NAPGQ99747 312 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 LRRC61Q9BV99 259 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 CINPQ9BW66 212 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 SLC25A18Q9H1K4 315 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 ZDHHC6Q9H6R6 413 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 FOXJ2Q9P0K8 574 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 SEPT10Q9P0V9 454 aa7.43□□□□□ -1.22
PHGDH-225ENST00000641720 ZNF469Q96JG9 3925 aaPredicted RBP7.43□□□□□ -1.22
PHGDH-225ENST00000641720 FER1L5A0AVI2 2057 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 MDC1Q14676 2089 aaKnown RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 CPED1A4D0V7 1026 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 CTAGE9A4FU28 777 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 A6NNZ2 444 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 C9orf172C9J069 976 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 F5H423 210 aaPredicted RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 H7C0C1 242 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 KRIT1O00522 736 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 RIOK3O14730 519 aaKnown RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 NVLO15381 856 aaKnown RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 PIGNO95427 931 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 IGSF6O95976 241 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 ALPPL2P10696 532 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 CCNB1P14635 433 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 CCNCP24863 283 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 ITGB7P26010 798 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 MSNP26038 577 aaKnown RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 PTPN3P26045 913 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 RBL1P28749 1068 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 CHRNA3P32297 505 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 NNMTP40261 264 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 CETN2P41208 172 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms