RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 SAC3D1A6NKF1 404 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 SOCS2O14508 198 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 AP1G1O43747 822 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 OR1I1O60431 355 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 PAPSS2O95340 614 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-223ENST00000641597 C8BP07358 591 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 HTR7P34969 479 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 NRG1Q02297 640 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-223ENST00000641597 DSC1Q08554 894 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 ZNF235Q14590 738 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 TSNQ15631 228 aaKnown RBP16.79■□□□□ 0.28
PHGDH-223ENST00000641597 IFNEQ86WN2 208 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 SLC22A9Q8IVM8 553 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 LGI2Q8N0V4 545 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 TMIGD2Q96BF3 282 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 TADA1Q96BN2 335 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 TUBGCP3Q96CW5 907 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 L3HYPDHQ96EM0 354 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 ACOX2Q99424 681 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 PIF1Q9H611 641 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 SPC25Q9HBM1 224 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 BPIFA1Q9NP55 256 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 AURKCQ9UQB9 309 aa16.79■□□□□ 0.28
PHGDH-223ENST00000641597 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-223ENST00000641597 CLASP2O75122 1294 aaKnown RBP16.78■□□□□ 0.28
PHGDH-223ENST00000641597 SRP72O76094 671 aaKnown RBP16.78■□□□□ 0.28
PHGDH-223ENST00000641597 MT-ND1P03886 318 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 PCSK6P29122 969 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 EEF1DP29692 281 aaKnown RBP16.78■□□□□ 0.28
PHGDH-223ENST00000641597 SCNN1BP51168 640 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 SGSHP51688 502 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 TRIM71Q2Q1W2 868 aaKnown RBP16.78■□□□□ 0.28
PHGDH-223ENST00000641597 KLHDC10Q6PID8 442 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 RNF19BQ6ZMZ0 732 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 TMEM173Q86WV6 379 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-223ENST00000641597 OR4K2Q8NGD2 314 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 OR4L1Q8NH43 312 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 MPP4Q96JB8 637 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 SLC25A23Q9BV35 468 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 SLAMF8Q9P0V8 285 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 HEMK1Q9Y5R4 338 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-223ENST00000641597 SUPT3HB4E1H0 165 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 SUPT3HO75486 399 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 GNAO1P09471 354 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 HGFP14210 728 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 OXTRP30559 389 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 CDH15P55291 814 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 DUSP4Q13115 394 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 PHYKPLQ8IUZ5 450 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 CCDC97Q96F63 343 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-223ENST00000641597 PHF12Q96QT6 1004 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 ATOH8Q96SQ7 321 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 POLR1EQ9GZS1 481 aaKnown RBP16.78■□□□□ 0.28
PHGDH-223ENST00000641597 CATSPERZQ9NTU4 200 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 POLG2Q9UHN1 485 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 PCDHB5Q9Y5E4 795 aa16.78■□□□□ 0.28
PHGDH-223ENST00000641597 FXYD1O00168 92 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 SEPT4O43236 478 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 KPNA6O60684 536 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 FAM58BPP0C7Q3 252 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 MTHFD1P11586 935 aaKnown RBP16.77■□□□□ 0.28
PHGDH-223ENST00000641597 C11orf91Q3C1V1 193 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 RABL3Q5HYI8 236 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 FAM45BPQ6NSW5 357 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 C8orf82Q6P1X6 216 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-223ENST00000641597 LRRC49Q8IUZ0 686 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 PIANPQ8IYJ0 282 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 CLYBLQ8N0X4 340 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 ATP6V0D2Q8N8Y2 350 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 MDGA1Q8NFP4 955 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 FAM45AQ8TCE6 357 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 CDKN2AIPNLQ96HQ2 116 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 FAR2Q96K12 515 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 CDK15Q96Q40 435 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 C1orf50Q9BV19 199 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 SLC2A11Q9BYW1 496 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 FBXO44Q9H4M3 255 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 SARDHQ9UL12 918 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 PCDHGC4Q9Y5F7 938 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 V9GYQ6 96 aa16.77■□□□□ 0.28
PHGDH-223ENST00000641597 TCRBV3S1A0A5B6 114 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 NPEPPSL1A6NEC2 478 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 IQCF5A8MTL0 148 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 H3BSA7 217 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 KIF3CO14782 793 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 AZIN1O14977 448 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 AKAP10O43572 662 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 CLIC3O95833 236 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 CAPNS1P04632 268 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 NCK1P16333 377 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 PSMC3P17980 439 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 RPL5P46777 297 aaKnown RBP16.77■□□□□ 0.27
PHGDH-223ENST00000641597 STC1P52823 247 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 IL10RBQ08334 325 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 LSAMPQ13449 338 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 TRIP4Q15650 581 aaPredicted RBP16.77■□□□□ 0.27
PHGDH-223ENST00000641597 AAK1Q2M2I8 961 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 DHFR2Q86XF0 187 aa16.77■□□□□ 0.27
PHGDH-223ENST00000641597 CHERPQ8IWX8 916 aaKnown RBP16.77■□□□□ 0.27
PHGDH-223ENST00000641597 DCP1BQ8IZD4 617 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms