RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 DDCP20711 480 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 PROZP22891 400 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ENTPD1P49961 510 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 C17orf67Q0P5P2 114 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 BTBD16Q32M84 506 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 UBE2UQ5VVX9 321 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 CHST3Q7LGC8 479 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 SH3RF1Q7Z6J0 888 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 HDDC3Q8N4P3 179 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 LEMD2Q8NC56 503 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 HASPINQ8TF76 798 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 MAFIPQ8WZ33 124 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 AP2M1Q96CW1 435 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 PGM2Q96G03 612 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 NARS2Q96I59 477 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 TXNDC15Q96J42 360 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF514Q96K75 400 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 GTPBP2Q9BX10 602 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 PLCXD1Q9NUJ7 323 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 TAB2Q9NYJ8 693 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 CXXC1Q9P0U4 656 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 NCDNQ9UBB6 729 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 FGD6Q6ZV73 1430 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 MAP2P11137 1827 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 LINC00587B1AMM8 73 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 KCNK1O00180 336 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 TIE1P35590 1138 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 RPL35P42766 123 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ALDH3B1P43353 468 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF618Q5T7W0 954 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 CCDC137Q6PK04 289 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 TMEM200AQ86VY9 491 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 FAM185AQ8N0U4 392 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 GLG1Q92896 1179 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 NXPE2Q96DL1 559 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 PELOQ9BRX2 385 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 CPNE5Q9HCH3 593 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ASCL3Q9NQ33 180 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 NINJ2Q9NZG7 142 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ABCG2Q9UNQ0 655 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 CA5BQ9Y2D0 317 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 KCNIP3Q9Y2W7 256 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 TNPO3Q9Y5L0 923 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 KIF21BO75037 1637 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 TNRQ92752 1358 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ISPDA4D126 451 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 TSTD3H0UI37 97 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 DAPK3O43293 454 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 RGS10O43665 173 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 UBOX5O94941 541 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 IL18RAPO95256 599 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 FUCA1P04066 466 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ADH1AP07327 375 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF23P17027 643 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 PAX6P26367 422 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 YWHABP31946 246 aaKnown RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 CCT4P50991 539 aaKnown RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 KCNMA1Q12791 1236 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 DRAP1Q14919 205 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 DGKDQ16760 1214 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 TRMT5Q32P41 509 aaKnown RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 C2orf27AQ580R0 203 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 FAM26FQ5R3K3 315 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 FAM46CQ5VWP2 391 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 AFTPHQ6ULP2 937 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ARPINQ7Z6K5 226 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 MTDHQ86UE4 582 aaKnown RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 LACC1Q8IV20 430 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 MCATQ8IVS2 390 aaKnown RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 GSPT2Q8IYD1 628 aaKnown RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 OR2L8Q8NGY9 312 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 SSH1Q8WYL5 1049 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ELP4Q96EB1 424 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 NECAB3Q96P71 396 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 MRPL37Q9BZE1 423 aaKnown RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 COQ10BQ9H8M1 238 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 PLSCR4Q9NRQ2 329 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 DCDC2Q9UHG0 476 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ADGRA2Q96PE1 1338 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 MCM3APO60318 1980 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 A0A1B0GUL6 1792 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 SYNMO15061 1565 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 FAM149AA5PLN7 773 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 FAM86C2PA6NEL3 165 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 AHRRA9YTQ3 701 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ALDH1A1P00352 501 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 SPATA31D3P0C874 917 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 THRAP10827 490 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 HOXB3P14651 431 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 PCSK1P29120 753 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 CHRNA3P32297 505 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 CDKN2CP42773 168 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 SYKP43405 635 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 CDC34P49427 236 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 CASP6P55212 293 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 GRIN2CQ14957 1233 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF569Q5MCW4 686 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 SPATA31D4Q6ZUB0 917 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 SNX20Q7Z614 316 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms