RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SCAMP5Q8TAC9 235 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 ZNF420Q8TAQ5 688 aaPredicted RBP10.9□□□□□ -0.66
SNIP1-204ENST00000638725 TANKQ92844 425 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 TMEM125Q96AQ2 219 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 VPS33AQ96AX1 596 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 DCPSQ96C86 337 aaKnown RBP10.9□□□□□ -0.66
SNIP1-204ENST00000638725 CATSPERBQ9H7T0 1116 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 NT5MQ9NPB1 228 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 RGS18Q9NS28 235 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 GID8Q9NWU2 228 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 POLG2Q9UHN1 485 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 USP22Q9UPT9 525 aa10.9□□□□□ -0.66
SNIP1-204ENST00000638725 ZFC3H1O60293 1989 aaKnown RBP10.9□□□□□ -0.66
SNIP1-204ENST00000638725 TCRBV5S2A0A599 114 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 MBLAC1A4D2B0 266 aaPredicted RBP10.89□□□□□ -0.67
SNIP1-204ENST00000638725 TREHO43280 583 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 IGLV3-25P01717 112 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 GPIP06744 558 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 CD1DP15813 335 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 CD86P42081 329 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 RPS9P46781 194 aaKnown RBP10.89□□□□□ -0.67
SNIP1-204ENST00000638725 CD97P48960 835 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 PGFP49763 221 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 NFKB2Q00653 900 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 ECT2LQ008S8 904 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 NFYCQ13952 458 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 IHHQ14623 411 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 OR4D1Q15615 310 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 PFKFB4Q16877 469 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 MANEALQ5VSG8 457 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 OGFOD2Q6N063 350 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 TIGD7Q6NT04 549 aaPredicted RBP10.89□□□□□ -0.67
SNIP1-204ENST00000638725 C14orf80Q86SX3 495 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 BORCS5Q969J3 196 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 KLHL5Q96PQ7 755 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 TSPAN18Q96SJ8 248 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 ALG2Q9H553 416 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 CD320Q9NPF0 282 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 SLC52A3Q9NQ40 469 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 SDR39U1Q9NRG7 319 aaPredicted RBP10.89□□□□□ -0.67
SNIP1-204ENST00000638725 CDH9Q9ULB4 789 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 DYNC1LI2O43237 492 aaPredicted RBP10.89□□□□□ -0.67
SNIP1-204ENST00000638725 MATN4O95460 622 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 FGF4P08620 206 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 LBPP18428 481 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 HOXC13P31276 330 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 CYP2C18P33260 490 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 TTKP33981 857 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 POLR2IP36954 125 aaKnown RBP10.89□□□□□ -0.67
SNIP1-204ENST00000638725 DSC2Q02487 901 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 ZNF829Q3KNS6 432 aaPredicted RBP10.89□□□□□ -0.67
SNIP1-204ENST00000638725 PYCR3Q53H96 274 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 KANK2Q63ZY3 851 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 TBPL2Q6SJ96 375 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 DCP1BQ8IZD4 617 aaKnown RBP10.89□□□□□ -0.67
SNIP1-204ENST00000638725 GPC2Q8N158 579 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 GOLM1Q8NBJ4 401 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 GABPB2Q8TAK5 448 aaPredicted RBP10.89□□□□□ -0.67
SNIP1-204ENST00000638725 PLEKHA8Q96JA3 519 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 TEX37Q96LM6 180 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 TMEM74Q96NL1 305 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 SEPHS2Q99611 448 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 SLC30A3Q99726 388 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 KCTD14Q9BQ13 255 aaPredicted RBP10.89□□□□□ -0.67
SNIP1-204ENST00000638725 PAAF1Q9BRP4 392 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 SLC25A51Q9H1U9 297 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 ARNT2Q9HBZ2 717 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 CSNK1G1Q9HCP0 422 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 DOLKQ9UPQ8 538 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 OAS3Q9Y6K5 1087 aaKnown RBP10.89□□□□□ -0.67
SNIP1-204ENST00000638725 MIA3Q5JRA6 1907 aa10.89□□□□□ -0.67
SNIP1-204ENST00000638725 ASPDHA6ND91 283 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 FGF10O15520 208 aaPredicted RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 B4GAT1O43505 415 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 BAIAP3O94812 1187 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 ZBTB11O95625 1053 aaPredicted RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 MYL3P08590 195 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 INHBBP09529 407 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 FAM163BP0C2L3 166 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 MTHFD2P13995 350 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 ZNF182P17025 639 aaPredicted RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 UGT1A1P22309 533 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 UGT1A4P22310 534 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 CCR1P32246 355 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 UGT1A3P35503 534 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 UGT1A5P35504 534 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 C21orf59P57076 290 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 LIPEQ05469 1076 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 EIF4EBP2Q13542 120 aaPredicted RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 PTPRCAPQ14761 206 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 SLC44A4Q53GD3 710 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 PAGE3Q5JUK9 113 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 ZNF549Q6P9A3 640 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 BLOC1S3Q6QNY0 202 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 TMEM86AQ8N2M4 240 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 GPRC5AQ8NFJ5 357 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 PABPC5Q96DU9 382 aaKnown RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 VPS50Q96JG6 964 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 PPP1R2P1Q96PQ5 205 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 GAD1Q99259 594 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms