RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 OR51F1A6NGY5 319 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 J3KR12 359 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 M0QZQ0 153 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 LDB2O43679 373 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 RHOQP17081 205 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 SLC6A2P23975 617 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 ACVR1Q04771 509 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 TNK2Q07912 1038 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 TMED1Q13445 227 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 ZBED5Q49AG3 693 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 OVOS1Q6IE37 1185 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 THEM5Q8N1Q8 247 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 ZNF786Q8N393 782 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 BBS5Q8N3I7 341 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 TEX26Q8N6G2 289 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 SH3RF2Q8TEC5 729 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 PEX13Q92968 403 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 TADA1Q96BN2 335 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 LRRC58Q96CX6 371 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 PABPC5Q96DU9 382 aaKnown RBP20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 KLHL5Q96PQ7 755 aa20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 PARK7Q99497 189 aaKnown RBP20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 AGO3Q9H9G7 860 aaKnown RBP20.08■□□□□ 0.81
SYNGAP1-227ENST00000638142 VPS4BO75351 444 aa20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 SLC4A1P02730 911 aa20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 GPIP06744 558 aa20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 FCGR1AP12314 374 aa20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 GRB7Q14451 532 aa20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 ATP6AP1Q15904 470 aa20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 ZNF549Q6P9A3 640 aa20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 DDIASQ8IXT1 998 aa20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 GPR150Q8NGU9 434 aa20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 TSPEARQ8WU66 669 aa20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 NMUR1Q9HB89 426 aa20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 PRDM5Q9NQX1 630 aaPredicted RBP20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 UXTQ9UBK9 157 aaPredicted RBP20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 EGFL7Q9UHF1 273 aa20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 NUDT5Q9UKK9 219 aa20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 PTGDR2Q9Y5Y4 395 aa20.08■□□□□ 0.8
SYNGAP1-227ENST00000638142 TTC24A2A3L6 582 aaPredicted RBP20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 SIX3O95343 332 aaPredicted RBP20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 GLP2RO95838 553 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 GNAO1P09471 354 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 ATXN1LP0C7T5 689 aaKnown RBP20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 IDO1P14902 403 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 ZNF37AP17032 561 aaPredicted RBP20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 GRIK1P39086 918 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 CCT8P50990 548 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 IHHQ14623 411 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 SLC36A3Q495N2 470 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 MRNIPQ6NTE8 343 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 TFAP2DQ7Z6R9 452 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 MRPL10Q7Z7H8 261 aaKnown RBP20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 SPATA2LQ8IUW3 424 aaPredicted RBP20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 ADGRG5Q8IZF4 528 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 RYBPQ8N488 228 aaPredicted RBP20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 TUBGCP3Q96CW5 907 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 TRIM54Q9BYV2 358 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 LIN28AQ9H9Z2 209 aaKnown RBP20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 CD320Q9NPF0 282 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 TMEM248Q9NWD8 314 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 TLR6Q9Y2C9 796 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 RNF103-CHMP3A0A140T963 221 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 LOC285095A0A1B0GVY8 99 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 DYTNA2CJ06 578 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 ARPC2O15144 300 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 HAPLN1P10915 354 aaPredicted RBP20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 MTHFD2P13995 350 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 PAX3P23760 479 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 FOXA1P55317 472 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 RPS6KA2Q15349 733 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 PFKFB4Q16877 469 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 TMTC4Q5T4D3 741 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 BLOC1S3Q6QNY0 202 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 SPRED1Q7Z699 444 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 ZNF554Q86TJ5 538 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 TRPV3Q8NET8 790 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 ABTB1Q969K4 478 aaPredicted RBP20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 TBATAQ96M53 351 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 ZYG11BQ9C0D3 744 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 TFB2MQ9H5Q4 396 aaKnown RBP20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 PLGRKTQ9HBL7 147 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 TBCCD1Q9NVR7 557 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 GIMAP2Q9UG22 337 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 Q9Y3F1 56 aa20.07■□□□□ 0.8
SYNGAP1-227ENST00000638142 NLRC5Q86WI3 1866 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 A0A1W2PQH9 124 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 UBXN8O00124 270 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 PPP6CO00743 305 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 RASAL1O95294 804 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 HGFP14210 728 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 TIAL1Q01085 375 aaKnown RBP eCLIP20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 CAPRIN1Q14444 709 aaKnown RBP20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 OR4D1Q15615 310 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 ACBD5Q5T8D3 534 aaPredicted RBP20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 DUS1LQ6P1R4 473 aaKnown RBP20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 CD300LGQ6UXG3 332 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 ZNF683Q8IZ20 524 aa20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 DCP1BQ8IZD4 617 aaKnown RBP20.06■□□□□ 0.8
SYNGAP1-227ENST00000638142 ARRDC2Q8TBH0 407 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms