RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TMEM236Q5W0B7 351 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 ZNF767PQ75MW2 155 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 STYXQ8WUJ0 223 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 CERS2Q96G23 380 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 TSNARE1Q96NA8 513 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 TRAF4Q9BUZ4 470 aaPredicted RBP12□□□□□ -0.49
CAPN3-221ENST00000638141 FAM49AQ9H0Q0 323 aaPredicted RBP12□□□□□ -0.49
CAPN3-221ENST00000638141 KCNN2Q9H2S1 579 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 ACAD9Q9H845 621 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 PAQR5Q9NXK6 330 aaPredicted RBP12□□□□□ -0.49
CAPN3-221ENST00000638141 FBXL12Q9NXK8 326 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 HMGXB4Q9UGU5 601 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 STAP1Q9ULZ2 295 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 PTPRJQ12913 1337 aa12□□□□□ -0.49
CAPN3-221ENST00000638141 A0A1W2PQ72 361 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 HMX3A6NHT5 357 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 METTL15A6NJ78 407 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 HACD1B0YJ81 288 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 PRPSAP2O60256 369 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 POLBP06746 335 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 PGK2P07205 417 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 CYP2A7P20853 494 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 MFSD10Q14728 455 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 ZNF404Q494X3 552 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 COQ5Q5HYK3 327 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 ARHGEF16Q5VV41 709 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 LYPD8Q6UX82 237 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 NOXA1Q86UR1 476 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 LURAP1LQ8IV03 231 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 GALNT6Q8NCL4 622 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 SETD6Q8TBK2 473 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 BPIFB1Q8TDL5 484 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 BSNDQ8WZ55 320 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 RORBQ92753 470 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 ALOXE3Q9BYJ1 711 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 NARFLQ9H6Q4 476 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 WDR6Q9NNW5 1121 aaKnown RBP11.99□□□□□ -0.49
CAPN3-221ENST00000638141 CISHQ9NSE2 258 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 NDUFAF1Q9Y375 327 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 A0A0X1KG70 313 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 CLDN24A6NM45 220 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 C12orf71A8MTZ7 269 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 TARM1B6A8C7 271 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 DDX39AO00148 427 aaKnown RBP11.99□□□□□ -0.49
CAPN3-221ENST00000638141 DPYSL4O14531 572 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 TPST1O60507 370 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 KATNA1O75449 491 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 SOAT2O75908 522 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 SLITRK5O94991 958 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 C2P06681 752 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 ASNSP08243 561 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 SBK3P0C264 359 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 GPD1P21695 349 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 HTR2BP41595 481 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 SLC9A3P48764 834 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 POLD2P49005 469 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 MLLT6P55198 1093 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-221ENST00000638141 GHRHRQ02643 423 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 GPR50Q13585 617 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 GPR162Q16538 588 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 DENND1BQ6P3S1 775 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 CYP20A1Q6UW02 462 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 PJA1Q8NG27 643 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 LHFPL5Q8TAF8 219 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 FBLIM1Q8WUP2 373 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 METTL2AQ96IZ6 378 aaKnown RBP11.99□□□□□ -0.49
CAPN3-221ENST00000638141 CDHR1Q96JP9 859 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 PEBP4Q96S96 227 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 C1QTNF7Q9BXJ2 289 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 ZFP14Q9HCL3 533 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 NSMCE4AQ9NXX6 385 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 VANGL2Q9ULK5 521 aa11.99□□□□□ -0.49
CAPN3-221ENST00000638141 SLC1A7O00341 560 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 CTDSP2O14595 271 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 CNTN5O94779 1100 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 GOT2P00505 430 aaKnown RBP11.98□□□□□ -0.49
CAPN3-221ENST00000638141 GLULP15104 373 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 IL7RP16871 459 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 RPS5P46782 204 aaKnown RBP11.98□□□□□ -0.49
CAPN3-221ENST00000638141 VASPP50552 380 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-221ENST00000638141 NAGLUP54802 743 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 MVKQ03426 396 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 IL18R1Q13478 541 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 FSTL4Q6MZW2 842 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 CDC42EP5Q6NZY7 148 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 TAS1R3Q7RTX0 852 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 PIWIL4Q7Z3Z4 852 aaKnown RBP11.98□□□□□ -0.49
CAPN3-221ENST00000638141 GALNT7Q86SF2 657 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 SP8Q8IXZ3 490 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 CELF2-AS1Q8N7Q2 184 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 SGCDQ92629 289 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 CEP19Q96LK0 163 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 MCMBPQ9BTE3 642 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 C1QTNF1Q9BXJ1 281 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 IDI2Q9BXS1 227 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 RAVER2Q9HCJ3 691 aaKnown RBP11.98□□□□□ -0.49
CAPN3-221ENST00000638141 CHRAC1Q9NRG0 131 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 TOR4AQ9NXH8 423 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 CCDC167Q9P0B6 97 aa11.98□□□□□ -0.49
CAPN3-221ENST00000638141 OPTCQ9UBM4 332 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms