RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SCRN2Q96FV2 425 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 CAPZA3Q96KX2 299 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 WDR92Q96MX6 357 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 TSGA13Q96PP4 275 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 CCDC3Q9BQI4 270 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 TEX101Q9BY14 249 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 PARD6BQ9BYG5 372 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 FRMD8Q9BZ67 464 aaPredicted RBP7.84□□□□□ -1.15
PNKP-229ENST00000637897 USP29Q9HBJ7 922 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 NT5MQ9NPB1 228 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 SPATS2LQ9NUQ6 558 aaKnown RBP7.84□□□□□ -1.15
PNKP-229ENST00000637897 DTLQ9NZJ0 730 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 SIRPGQ9P1W8 387 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 RCOR3Q9P2K3 495 aaPredicted RBP7.84□□□□□ -1.15
PNKP-229ENST00000637897 RAB21Q9UL25 225 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 CNOT6Q9ULM6 557 aaKnown RBP7.84□□□□□ -1.15
PNKP-229ENST00000637897 PADI4Q9UM07 663 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 SATB2Q9UPW6 733 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 AK5Q9Y6K8 562 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 CFAP46Q8IYW2 2715 aa7.84□□□□□ -1.15
PNKP-229ENST00000637897 ASH1LQ9NR48 2969 aaKnown RBP7.83□□□□□ -1.16
PNKP-229ENST00000637897 CDRT15L2A8MXV6 281 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 H3BM21 787 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 MYO1FO00160 1098 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 ZNF185O15231 689 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 B4GAT1O43505 415 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 SOCS5O75159 536 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 MTA2O94776 668 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 RASGRP1O95267 797 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 EML2O95834 649 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 FTCDO95954 541 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 PRB1P04280 392 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 ELFN1P0C7U0 828 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 ALPPL2P10696 532 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 AK4P27144 223 aaPredicted RBP7.83□□□□□ -1.16
PNKP-229ENST00000637897 VIPR1P32241 457 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 ARL4AP40617 200 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 MMP13P45452 471 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 LSSP48449 732 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 ARSDP51689 593 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 GABREP78334 506 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 CFHR1Q03591 330 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 SRSF6Q13247 344 aaKnown RBP7.83□□□□□ -1.16
PNKP-229ENST00000637897 HLTFQ14527 1009 aaKnown RBP eCLIP7.83□□□□□ -1.16
PNKP-229ENST00000637897 GLE1Q53GS7 698 aaKnown RBP7.83□□□□□ -1.16
PNKP-229ENST00000637897 ERAP2Q6P179 960 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 WDR93Q6P2C0 686 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 IGF2-ASQ6U949 168 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 NPNTQ6UXI9 565 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 ZNF574Q6ZN55 896 aaPredicted RBP7.83□□□□□ -1.16
PNKP-229ENST00000637897 DAAM2Q86T65 1068 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 ARL10Q8N8L6 244 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 OR56A4Q8NGH8 313 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 GPBAR1Q8TDU6 330 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 COG1Q8WTW3 980 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 BTN2A2Q8WVV5 523 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 FGF11Q92914 225 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 SCAMP4Q969E2 229 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 CCDC74AQ96AQ1 378 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 TADA1Q96BN2 335 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 SCARF2Q96GP6 870 aaPredicted RBP7.83□□□□□ -1.16
PNKP-229ENST00000637897 SLC46A1Q96NT5 459 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 LGMNQ99538 433 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 IL12RB2Q99665 862 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 SEMA3CQ99985 751 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 ZNF670Q9BS34 389 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 HERPUD2Q9BSE4 406 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 SLC13A1Q9BZW2 595 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 ABCG8Q9H221 673 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 ANKZF1Q9H8Y5 726 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 ARFGAP3Q9NP61 516 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 KLQ9UEF7 1012 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 CD84Q9UIB8 345 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 AMFRQ9UKV5 643 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 PHTF1Q9UMS5 762 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 RNF215Q9Y6U7 377 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 MAST4O15021 2626 aa7.83□□□□□ -1.16
PNKP-229ENST00000637897 A0A0J9YYE9 177 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.82□□□□□ -1.16
PNKP-229ENST00000637897 PRSS38A1L453 326 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 TMEM110-MUSTN1A8MSY1 372 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 MIF4GDA9UHW6 222 aaKnown RBP7.82□□□□□ -1.16
PNKP-229ENST00000637897 PDE2AO00408 941 aaPredicted RBP7.82□□□□□ -1.16
PNKP-229ENST00000637897 TNFRSF10CO14798 259 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 MATN3O15232 486 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 ZIC2O95409 532 aaPredicted RBP7.82□□□□□ -1.16
PNKP-229ENST00000637897 CPP00450 1065 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 TRBC1P01850 177 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 FGF1P05230 155 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 ANXA6P08133 673 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 HGFP14210 728 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 XPAP23025 273 aaPredicted RBP7.82□□□□□ -1.16
PNKP-229ENST00000637897 KDELR1P24390 212 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 CXCR5P32302 372 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 CA5AP35218 305 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 GJC1P36383 396 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 ETV5P41161 510 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 RENBPP51606 427 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 STC1P52823 247 aa7.82□□□□□ -1.16
PNKP-229ENST00000637897 MAZP56270 477 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms