RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 DCXO43602 365 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 SPAG7O75391 227 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 S1PR4O95977 384 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 ITGALP20701 1170 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 XPAP23025 273 aaPredicted RBP15.31■□□□□ 0.04
CLN6-219ENST00000637329 CRABP2P29373 138 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 RPA3P35244 121 aaPredicted RBP15.31■□□□□ 0.04
CLN6-219ENST00000637329 PPARGP37231 505 aaPredicted RBP15.31■□□□□ 0.04
CLN6-219ENST00000637329 MMP12P39900 470 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 SOX9P48436 509 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 CCT5P48643 541 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 ADARP55265 1226 aaKnown RBP15.31■□□□□ 0.04
CLN6-219ENST00000637329 DCDC1P59894 354 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 GNGT1P63211 74 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 XIAPP98170 497 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 ELP6Q0PNE2 266 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 PEX6Q13608 980 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 ARHGEF7Q14155 803 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 MPP2Q14168 576 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 PTPRCAPQ14761 206 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 LYPLAL1Q5VWZ2 237 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 LRRC66Q68CR7 880 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 CERS6Q6ZMG9 384 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 PARS2Q7L3T8 475 aaKnown RBP15.31■□□□□ 0.04
CLN6-219ENST00000637329 TRMT11Q7Z4G4 463 aaKnown RBP15.31■□□□□ 0.04
CLN6-219ENST00000637329 SFTPA1Q8IWL2 248 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 STK40Q8N2I9 435 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 SLC44A3Q8N4M1 653 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 ZNF366Q8N895 744 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 ZNF513Q8N8E2 541 aaPredicted RBP15.31■□□□□ 0.04
CLN6-219ENST00000637329 ANKRD42Q8N9B4 389 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 MDM1Q8TC05 714 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 DTX3LQ8TDB6 740 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 DYDC1Q8WWB3 177 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 PBXIP1Q96AQ6 731 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 EID2BQ96D98 161 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 ATXN7L3BQ96GX2 97 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 KLF6Q99612 283 aaPredicted RBP15.31■□□□□ 0.04
CLN6-219ENST00000637329 CDH19Q9H159 772 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 SUDS3Q9H7L9 328 aaPredicted RBP15.31■□□□□ 0.04
CLN6-219ENST00000637329 POPDC3Q9HBV1 291 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 CD320Q9NPF0 282 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 PKD2L2Q9NZM6 624 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 STON1Q9Y6Q2 735 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 PIAS3Q9Y6X2 628 aa15.31■□□□□ 0.04
CLN6-219ENST00000637329 WDFY4Q6ZS81 3184 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 TRBV5-4A0A0C4DH59 114 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 GLYATL1P3A0A0U1RQE8 302 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 RGSL1A5PLK6 1076 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 H0Y858 1186 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 KPNA3O00505 521 aaPredicted RBP15.3■□□□□ 0.04
CLN6-219ENST00000637329 HAUS5O94927 633 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 CLDN7O95471 211 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 PRAMEF1O95521 474 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 ASMTLO95671 621 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 EPHX1P07099 455 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 COL6A2P12110 1019 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 HLA-EP13747 358 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 STMN1P16949 149 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 DRD1P21728 446 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 LHCGRP22888 699 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 PMLP29590 882 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 LSP1P33241 339 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 KIR2DL1P43626 348 aaPredicted RBP15.3■□□□□ 0.04
CLN6-219ENST00000637329 GALK1P51570 392 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 RAB10P61026 200 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 IL9RQ01113 521 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 CAMK2GQ13555 558 aaPredicted RBP15.3■□□□□ 0.04
CLN6-219ENST00000637329 PDE1CQ14123 709 aaPredicted RBP15.3■□□□□ 0.04
CLN6-219ENST00000637329 USP10Q14694 798 aaKnown RBP15.3■□□□□ 0.04
CLN6-219ENST00000637329 SEPT7Q16181 437 aaKnown RBP15.3■□□□□ 0.04
CLN6-219ENST00000637329 DBN1Q16643 649 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 GPR33Q49SQ1 333 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 TMEM196Q5HYL7 178 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 FAM46CQ5VWP2 391 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 KYAT3Q6YP21 454 aaKnown RBP15.3■□□□□ 0.04
CLN6-219ENST00000637329 SNX20Q7Z614 316 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 TSPAN33Q86UF1 283 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 PIP4K2CQ8TBX8 421 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 TCP10LQ8TDR4 215 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 RAB7BQ96AH8 199 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 ELMO2Q96JJ3 720 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 TTC1Q99614 292 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 MTG2Q9H4K7 406 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 PCDH12Q9NPG4 1184 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 DYRK4Q9NR20 520 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 CACNA2D2Q9NY47 1150 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 DCDC2Q9UHG0 476 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 HCN2Q9UL51 889 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 SLC39A10Q9ULF5 831 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 GRID1Q9ULK0 1009 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 COMMD10Q9Y6G5 202 aa15.3■□□□□ 0.04
CLN6-219ENST00000637329 A0A087X1B8 175 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 K7EQS6 105 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 GAPDHSO14556 408 aaPredicted RBP15.29■□□□□ 0.04
CLN6-219ENST00000637329 SRP72O76094 671 aaKnown RBP15.29■□□□□ 0.04
CLN6-219ENST00000637329 C1SP09871 688 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 DHRS4L1P0CG22 281 aa15.29■□□□□ 0.04
CLN6-219ENST00000637329 CHRM1P11229 460 aaPredicted RBP15.29■□□□□ 0.04
CLN6-219ENST00000637329 TIMP2P16035 220 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms